Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREK1IP1Q8N9Q2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SREK1IP1Q8N9Q2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SREK1IP1Q8N9Q2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SREK1IP1Q8N9Q2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SREK1IP1Q8N9Q2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SREK1IP1Q8N9Q2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
SREK1IP1Q8N9Q2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 AP003733.4-201ENST00000623785 1697 ntBASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SREK1IP1Q8N9Q2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SREK1IP1Q8N9Q2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SREK1IP1Q8N9Q2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms