Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF135Q8IUD6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF135Q8IUD6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24■■□□□ 1.43
RNF135Q8IUD6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RNF135Q8IUD6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF135Q8IUD6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF135Q8IUD6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24■■□□□ 1.43
RNF135Q8IUD6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF135Q8IUD6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24■■□□□ 1.43
RNF135Q8IUD6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24■■□□□ 1.43
RNF135Q8IUD6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RNF135Q8IUD6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF135Q8IUD6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF135Q8IUD6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF135Q8IUD6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF135Q8IUD6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RNF135Q8IUD6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF135Q8IUD6 AL031602.1-201ENST00000633169 911 ntBASIC23.97■■□□□ 1.43
RNF135Q8IUD6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF135Q8IUD6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.95■■□□□ 1.43
RNF135Q8IUD6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 SLC6A10P-202ENST00000431994 2058 ntBASIC23.95■■□□□ 1.42
RNF135Q8IUD6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 YBX1P1-201ENST00000445822 960 ntBASIC23.95■■□□□ 1.42
RNF135Q8IUD6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
RNF135Q8IUD6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L2-201ENST00000561772 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 AC233992.3-201ENST00000607491 485 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L6-201ENST00000626483 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L1-201ENST00000627662 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L8-201ENST00000629013 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L3-201ENST00000630187 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L7-201ENST00000630678 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 DUX4L5-201ENST00000630834 1275 ntBASIC23.94■■□□□ 1.42
RNF135Q8IUD6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF135Q8IUD6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.93■■□□□ 1.42
RNF135Q8IUD6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF135Q8IUD6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF135Q8IUD6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms