Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.41■■□□□ 1.66
RNF180Q86T96 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF180Q86T96 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RNF180Q86T96 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF180Q86T96 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.4■■□□□ 1.66
RNF180Q86T96 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.4■■□□□ 1.66
RNF180Q86T96 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF180Q86T96 AL358852.1-201ENST00000623174 1268 ntBASIC25.4■■□□□ 1.66
RNF180Q86T96 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF180Q86T96 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF180Q86T96 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF180Q86T96 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF180Q86T96 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF180Q86T96 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L2-201ENST00000561772 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L6-201ENST00000626483 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L1-201ENST00000627662 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L8-201ENST00000629013 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L3-201ENST00000630187 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L7-201ENST00000630678 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 DUX4L5-201ENST00000630834 1275 ntBASIC25.39■■□□□ 1.66
RNF180Q86T96 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.39■■□□□ 1.65
RNF180Q86T96 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF180Q86T96 AL161729.1-201ENST00000604104 1402 ntBASIC25.38■■□□□ 1.65
RNF180Q86T96 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF180Q86T96 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF180Q86T96 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.38■■□□□ 1.65
RNF180Q86T96 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
RNF180Q86T96 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF180Q86T96 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.38■■□□□ 1.65
RNF180Q86T96 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.38■■□□□ 1.65
RNF180Q86T96 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF180Q86T96 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF180Q86T96 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RNF180Q86T96 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF180Q86T96 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.37■■□□□ 1.65
RNF180Q86T96 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.37■■□□□ 1.65
RNF180Q86T96 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RNF180Q86T96 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF180Q86T96 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RNF180Q86T96 AC027612.3-201ENST00000413684 1047 ntBASIC25.37■■□□□ 1.65
RNF180Q86T96 AC123595.1-201ENST00000440769 1046 ntBASIC25.37■■□□□ 1.65
RNF180Q86T96 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.37■■□□□ 1.65
RNF180Q86T96 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF180Q86T96 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF180Q86T96 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.36■■□□□ 1.65
RNF180Q86T96 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.36■■□□□ 1.65
RNF180Q86T96 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.36■■□□□ 1.65
RNF180Q86T96 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.36■■□□□ 1.65
RNF180Q86T96 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
RNF180Q86T96 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF180Q86T96 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF180Q86T96 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF180Q86T96 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RNF180Q86T96 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RNF180Q86T96 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RNF180Q86T96 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RNF180Q86T96 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF180Q86T96 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
RNF180Q86T96 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
RNF180Q86T96 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF180Q86T96 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF180Q86T96 AC092437.1-201ENST00000624794 1048 ntBASIC25.35■■□□□ 1.65
RNF180Q86T96 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF180Q86T96 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF180Q86T96 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.35■■□□□ 1.65
RNF180Q86T96 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF180Q86T96 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF180Q86T96 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.34■■□□□ 1.65
RNF180Q86T96 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF180Q86T96 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.34■■□□□ 1.65
RNF180Q86T96 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.34■■□□□ 1.65
RNF180Q86T96 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF180Q86T96 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.34■■□□□ 1.65
RNF180Q86T96 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.34■■□□□ 1.65
RNF180Q86T96 AC141586.4-201ENST00000624558 1573 ntBASIC25.34■■□□□ 1.65
RNF180Q86T96 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF180Q86T96 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RNF180Q86T96 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF180Q86T96 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF180Q86T96 IGHV3-19-201ENST00000521488 291 ntBASIC25.33■■□□□ 1.65
RNF180Q86T96 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RNF180Q86T96 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.33■■□□□ 1.65
RNF180Q86T96 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF180Q86T96 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RNF180Q86T96 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF180Q86T96 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.32■■□□□ 1.64
RNF180Q86T96 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF180Q86T96 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF180Q86T96 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
RNF180Q86T96 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.32■■□□□ 1.64
RNF180Q86T96 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.32■■□□□ 1.64
RNF180Q86T96 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF180Q86T96 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms