Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.75■■□□□ 1.07
RNF44Q7L0R7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF44Q7L0R7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 AC004812.2-201ENST00000611079 2094 ntBASIC21.73■■□□□ 1.07
RNF44Q7L0R7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF44Q7L0R7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF44Q7L0R7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF44Q7L0R7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF44Q7L0R7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 MIR4466-201ENST00000606121 54 ntBASIC21.7■■□□□ 1.06
RNF44Q7L0R7 AC008406.3-201ENST00000620001 1374 ntBASIC21.7■■□□□ 1.06
RNF44Q7L0R7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF44Q7L0R7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF44Q7L0R7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF44Q7L0R7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF44Q7L0R7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RNF44Q7L0R7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF44Q7L0R7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF44Q7L0R7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF44Q7L0R7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 AC009102.2-201ENST00000606772 1639 ntBASIC21.66■■□□□ 1.06
RNF44Q7L0R7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF44Q7L0R7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 AL136116.3-201ENST00000402907 1138 ntBASIC21.65■■□□□ 1.06
RNF44Q7L0R7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF44Q7L0R7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms