Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.27■■□□□ 1.96
USP50Q70EL3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.27■■□□□ 1.96
USP50Q70EL3 LINC02228-203ENST00000641970 1355 ntBASIC27.27■■□□□ 1.96
USP50Q70EL3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP50Q70EL3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP50Q70EL3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.27■■□□□ 1.96
USP50Q70EL3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.27■■□□□ 1.96
USP50Q70EL3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP50Q70EL3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP50Q70EL3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP50Q70EL3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.26■■□□□ 1.95
USP50Q70EL3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.25■■□□□ 1.95
USP50Q70EL3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP50Q70EL3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.25■■□□□ 1.95
USP50Q70EL3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP50Q70EL3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.24■■□□□ 1.95
USP50Q70EL3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.24■■□□□ 1.95
USP50Q70EL3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
USP50Q70EL3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
USP50Q70EL3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
USP50Q70EL3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.23■■□□□ 1.95
USP50Q70EL3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
USP50Q70EL3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.23■■□□□ 1.95
USP50Q70EL3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.23■■□□□ 1.95
USP50Q70EL3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
USP50Q70EL3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.23■■□□□ 1.95
USP50Q70EL3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.23■■□□□ 1.95
USP50Q70EL3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
USP50Q70EL3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
USP50Q70EL3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
USP50Q70EL3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
USP50Q70EL3 AC080038.1-201ENST00000611274 1154 ntBASIC27.22■■□□□ 1.95
USP50Q70EL3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.22■■□□□ 1.95
USP50Q70EL3 AC142086.6-201ENST00000621154 1765 ntBASIC27.22■■□□□ 1.95
USP50Q70EL3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.22■■□□□ 1.95
USP50Q70EL3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.21■■□□□ 1.95
USP50Q70EL3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.21■■□□□ 1.95
USP50Q70EL3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.21■■□□□ 1.95
USP50Q70EL3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
USP50Q70EL3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
USP50Q70EL3 AC010501.1-201ENST00000606270 1962 ntBASIC27.2■■□□□ 1.95
USP50Q70EL3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
USP50Q70EL3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.2■■□□□ 1.94
USP50Q70EL3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.2■■□□□ 1.94
USP50Q70EL3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC27.2■■□□□ 1.94
USP50Q70EL3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.2■■□□□ 1.94
USP50Q70EL3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.19■■□□□ 1.94
USP50Q70EL3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
USP50Q70EL3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
USP50Q70EL3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
USP50Q70EL3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.19■■□□□ 1.94
USP50Q70EL3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.19■■□□□ 1.94
USP50Q70EL3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
USP50Q70EL3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
USP50Q70EL3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.18■■□□□ 1.94
USP50Q70EL3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.18■■□□□ 1.94
USP50Q70EL3 RAP2CP1-201ENST00000605103 478 ntBASIC27.18■■□□□ 1.94
USP50Q70EL3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
USP50Q70EL3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP50Q70EL3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP50Q70EL3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP50Q70EL3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
USP50Q70EL3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
USP50Q70EL3 AC141586.4-201ENST00000624558 1573 ntBASIC27.17■■□□□ 1.94
USP50Q70EL3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.16■■□□□ 1.94
USP50Q70EL3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.16■■□□□ 1.94
USP50Q70EL3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 AC006015.1-201ENST00000429970 570 ntBASIC27.16■■□□□ 1.94
USP50Q70EL3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.16■■□□□ 1.94
USP50Q70EL3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.16■■□□□ 1.94
USP50Q70EL3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
USP50Q70EL3 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.16■■□□□ 1.94
USP50Q70EL3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP50Q70EL3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
USP50Q70EL3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.15■■□□□ 1.94
USP50Q70EL3 ABHD17AP1-201ENST00000358206 933 ntBASIC27.15■■□□□ 1.94
USP50Q70EL3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.15■■□□□ 1.94
USP50Q70EL3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.15■■□□□ 1.94
USP50Q70EL3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.15■■□□□ 1.94
USP50Q70EL3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
USP50Q70EL3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
USP50Q70EL3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
USP50Q70EL3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
USP50Q70EL3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
USP50Q70EL3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.14■■□□□ 1.94
USP50Q70EL3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms