Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.98■□□□□ 0.95
H3F3CQ6NXT2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 SUDS3P1-201ENST00000505831 966 ntBASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 AL031432.3-201ENST00000607698 485 ntBASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3F3CQ6NXT2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 EDA-201ENST00000338901 1233 ntBASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 AC099791.2-201ENST00000605725 427 ntBASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3F3CQ6NXT2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 SYT6-210ENST00000641643 1587 ntBASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 AC241377.3-202ENST00000626088 1088 ntBASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 AC241585.3-202ENST00000628937 1088 ntBASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 AC245100.8-202ENST00000629247 1058 ntBASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H3F3CQ6NXT2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3F3CQ6NXT2 AC020928.2-201ENST00000588717 2197 ntBASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 AL138724.1-201ENST00000606771 1088 ntBASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 AL355001.2-201ENST00000620617 1191 ntBASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3F3CQ6NXT2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.92■□□□□ 0.94
H3F3CQ6NXT2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3F3CQ6NXT2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 AC142381.2-201ENST00000566120 298 ntBASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms