Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 AC092068.2-201ENST00000590491 1708 ntBASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO1Q2MKA7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO1Q2MKA7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RSPO1Q2MKA7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO1Q2MKA7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.74■□□□□ 0.75
RSPO1Q2MKA7 C9orf163-202ENST00000624034 2573 ntBASIC19.74■□□□□ 0.75
RSPO1Q2MKA7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO1Q2MKA7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 BX664725.1-201ENST00000438252 379 ntBASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO1Q2MKA7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 AL451085.2-201ENST00000605085 799 ntBASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 AC133561.1-201ENST00000568600 2415 ntBASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO1Q2MKA7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 Z92544.1-202ENST00000571933 1220 ntBASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 AC068473.5-201ENST00000616428 2072 ntBASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
RSPO1Q2MKA7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 AC009299.2-201ENST00000482477 511 ntBASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 AC092028.1-203ENST00000608262 953 ntBASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 MIR6722-201ENST00000617286 78 ntBASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO1Q2MKA7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO1Q2MKA7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms