Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 NSG1YHR133C 876 nt4.74□□□□□ -1.65
RUP1Q12242 PNP1YLR209C 936 nt4.74□□□□□ -1.65
RUP1Q12242 ARG8YOL140W 1272 nt4.74□□□□□ -1.65
RUP1Q12242 YPL073CYPL073C 486 nt4.74□□□□□ -1.65
RUP1Q12242 YBR126W-AYBR126W-A 207 nt4.74□□□□□ -1.65
RUP1Q12242 ARC40YBR234C 1155 nt4.74□□□□□ -1.65
RUP1Q12242 HXT4YHR092C 1731 nt4.74□□□□□ -1.65
RUP1Q12242 GPR1YDL035C 2886 nt4.74□□□□□ -1.65
RUP1Q12242 PEX19YDL065C 1029 nt4.73□□□□□ -1.65
RUP1Q12242 TOM5YPR133W-A 153 nt4.73□□□□□ -1.65
RUP1Q12242 CLD1YGR110W 1338 nt4.72□□□□□ -1.65
RUP1Q12242 YTA12YMR089C 2478 nt4.72□□□□□ -1.65
RUP1Q12242 SEC39YLR440C 2130 nt4.72□□□□□ -1.65
RUP1Q12242 YDR445CYDR445C 408 nt4.72□□□□□ -1.65
RUP1Q12242 MF(ALPHA)2YGL089C 363 nt4.72□□□□□ -1.65
RUP1Q12242 YHL049CYHL049C 816 nt4.72□□□□□ -1.65
RUP1Q12242 GPP1YIL053W 753 nt4.72□□□□□ -1.65
RUP1Q12242 NCE103YNL036W 666 nt4.72□□□□□ -1.65
RUP1Q12242 SMA1YPL027W 738 nt4.72□□□□□ -1.65
RUP1Q12242 UGA2YBR006W 1494 nt4.72□□□□□ -1.65
RUP1Q12242 MMT2YPL224C 1455 nt4.72□□□□□ -1.65
RUP1Q12242 TAF5YBR198C 2397 nt4.72□□□□□ -1.65
RUP1Q12242 ASK10YGR097W 3441 nt4.72□□□□□ -1.65
RUP1Q12242 HOT1YMR172W 2160 nt4.71□□□□□ -1.65
RUP1Q12242 MBP1YDL056W 2502 nt4.71□□□□□ -1.66
RUP1Q12242 YDL183CYDL183C 963 nt4.71□□□□□ -1.66
RUP1Q12242 FAU1YER183C 636 nt4.71□□□□□ -1.66
RUP1Q12242 SUT1YGL162W 900 nt4.71□□□□□ -1.66
RUP1Q12242 PUS6YGR169C 1215 nt4.71□□□□□ -1.66
RUP1Q12242 YLL017WYLL017W 312 nt4.71□□□□□ -1.66
RUP1Q12242 TRM10YOL093W 882 nt4.71□□□□□ -1.66
RUP1Q12242 CKB2YOR039W 777 nt4.71□□□□□ -1.66
RUP1Q12242 VPS36YLR417W 1701 nt4.71□□□□□ -1.66
RUP1Q12242 DXO1YDR370C 1329 nt4.71□□□□□ -1.66
RUP1Q12242 LYS2YBR115C 4179 nt4.7□□□□□ -1.66
RUP1Q12242 RIP1YEL024W 648 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)CtK(CUU)C 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)D1tK(CUU)D1 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)D2tK(CUU)D2 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)E1tK(CUU)E1 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)E2tK(CUU)E2 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)FtK(CUU)F 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)G1tK(CUU)G1 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)G2tK(CUU)G2 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)G3tK(CUU)G3 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)ItK(CUU)I 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)JtK(CUU)J 73 nt4.7□□□□□ -1.66
RUP1Q12242 YER147C-AYER147C-A 411 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)KtK(CUU)K 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)MtK(CUU)M 73 nt4.7□□□□□ -1.66
RUP1Q12242 tK(CUU)PtK(CUU)P 73 nt4.7□□□□□ -1.66
RUP1Q12242 LYS5YGL154C 819 nt4.7□□□□□ -1.66
RUP1Q12242 YLR124WYLR124W 345 nt4.7□□□□□ -1.66
RUP1Q12242 UIP3YAR027W 708 nt4.7□□□□□ -1.66
RUP1Q12242 YBR196C-BYBR196C-B 105 nt4.7□□□□□ -1.66
RUP1Q12242 SNF2YOR290C 5112 nt4.7□□□□□ -1.66
RUP1Q12242 THI20YOL055C 1656 nt4.7□□□□□ -1.66
RUP1Q12242 FAP1YNL023C 2898 nt4.7□□□□□ -1.66
RUP1Q12242 ISR1YPR106W 1332 nt4.7□□□□□ -1.66
RUP1Q12242 TUB2YFL037W 1374 nt4.69□□□□□ -1.66
RUP1Q12242 HNT2YDR305C 654 nt4.69□□□□□ -1.66
RUP1Q12242 DSE3YOR264W 1293 nt4.69□□□□□ -1.66
RUP1Q12242 WTM2YOR229W 1404 nt4.69□□□□□ -1.66
RUP1Q12242 MST1YKL194C 1389 nt4.68□□□□□ -1.66
RUP1Q12242 SUP35YDR172W 2058 nt4.68□□□□□ -1.66
RUP1Q12242 PCT1YGR202C 1275 nt4.68□□□□□ -1.66
RUP1Q12242 YKL169CYKL169C 384 nt4.68□□□□□ -1.66
RUP1Q12242 MDG1YNL173C 1101 nt4.68□□□□□ -1.66
RUP1Q12242 YNL174WYNL174W 573 nt4.68□□□□□ -1.66
RUP1Q12242 UBA3YPR066W 900 nt4.68□□□□□ -1.66
RUP1Q12242 VBA2YBR293W 1425 nt4.68□□□□□ -1.66
RUP1Q12242 IFM1YOL023W 2031 nt4.68□□□□□ -1.66
RUP1Q12242 IBA57YJR122W 1494 nt4.68□□□□□ -1.66
RUP1Q12242 SET4YJL105W 1683 nt4.67□□□□□ -1.66
RUP1Q12242 HER2YMR293C 1395 nt4.67□□□□□ -1.66
RUP1Q12242 SYP1YCR030C 2613 nt4.67□□□□□ -1.66
RUP1Q12242 AIR2YDL175C 1035 nt4.67□□□□□ -1.66
RUP1Q12242 YGL262WYGL262W 528 nt4.67□□□□□ -1.66
RUP1Q12242 PSR1YLL010C 1284 nt4.67□□□□□ -1.66
RUP1Q12242 PRD1YCL057W 2139 nt4.67□□□□□ -1.66
RUP1Q12242 SEC9YGR009C 1956 nt4.67□□□□□ -1.66
RUP1Q12242 OLE1YGL055W 1533 nt4.67□□□□□ -1.66
RUP1Q12242 RRB1YMR131C 1536 nt4.67□□□□□ -1.66
RUP1Q12242 RAD16YBR114W 2373 nt4.67□□□□□ -1.66
RUP1Q12242 UBC1YDR177W 648 nt4.66□□□□□ -1.66
RUP1Q12242 CAX4YGR036C 720 nt4.66□□□□□ -1.66
RUP1Q12242 YAL044W-AYAL044W-A 333 nt4.66□□□□□ -1.66
RUP1Q12242 CUE5YOR042W 1236 nt4.66□□□□□ -1.66
RUP1Q12242 HPC2YBR215W 1878 nt4.66□□□□□ -1.66
RUP1Q12242 NUP2YLR335W 2163 nt4.65□□□□□ -1.66
RUP1Q12242 SER33YIL074C 1410 nt4.65□□□□□ -1.66
RUP1Q12242 GLE2YER107C 1098 nt4.65□□□□□ -1.67
RUP1Q12242 YGR122WYGR122W 1209 nt4.65□□□□□ -1.67
RUP1Q12242 CSR1YLR380W 1227 nt4.65□□□□□ -1.67
RUP1Q12242 DHH1YDL160C 1521 nt4.65□□□□□ -1.67
RUP1Q12242 DRN1YGR093W 1524 nt4.65□□□□□ -1.67
RUP1Q12242 EKI1YDR147W 1605 nt4.64□□□□□ -1.67
RUP1Q12242 CTT1YGR088W 1689 nt4.64□□□□□ -1.67
RUP1Q12242 EAR1YMR171C 1653 nt4.64□□□□□ -1.67
RUP1Q12242 YER158CYER158C 1722 nt4.64□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms