Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YGR027W-AYGR027W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YGR038C-AYGR038C-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YGR161C-CYGR161C-C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YJR026WYJR026W 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YJR028WYJR028W 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YAR010CYAR010C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YLR157C-AYLR157C-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YLR227W-AYLR227W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YLR256W-AYLR256W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YML040WYML040W 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YML045W-AYML045W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YMR051CYMR051C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YNL054W-AYNL054W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YOL103W-AYOL103W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YPL257W-AYPL257W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YPR137C-AYPR137C-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YPR158C-CYPR158C-C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 RIT1YMR283C 1542 nt6.19□□□□□ -1.42
UBP3Q01477 FPK1YNR047W 2682 nt6.19□□□□□ -1.42
UBP3Q01477 HSP78YDR258C 2436 nt6.18□□□□□ -1.42
UBP3Q01477 YDR444WYDR444W 2064 nt6.18□□□□□ -1.42
UBP3Q01477 APM3YBR288C 1452 nt6.18□□□□□ -1.42 RIP-Chip
UBP3Q01477 CAB1YDR531W 1104 nt6.18□□□□□ -1.42
UBP3Q01477 YER148W-AYER148W-A 579 nt6.18□□□□□ -1.42
UBP3Q01477 YGR176WYGR176W 348 nt6.18□□□□□ -1.42
UBP3Q01477 YGR204C-AYGR204C-A 114 nt6.18□□□□□ -1.42
UBP3Q01477 SNL1YIL016W 480 nt6.18□□□□□ -1.42 RIP-Chip
UBP3Q01477 NPA3YJR072C 1158 nt6.18□□□□□ -1.42 RIP-Chip
UBP3Q01477 ASK1YKL052C 879 nt6.18□□□□□ -1.42
UBP3Q01477 YML101C-AYML101C-A 318 nt6.18□□□□□ -1.42
UBP3Q01477 YNG1YOR064C 660 nt6.18□□□□□ -1.42
UBP3Q01477 YPL191CYPL191C 1083 nt6.18□□□□□ -1.42
UBP3Q01477 APA1YCL050C 966 nt6.18□□□□□ -1.42
UBP3Q01477 YLR345WYLR345W 1530 nt6.18□□□□□ -1.42 RIP-Chip
UBP3Q01477 SEO1YAL067C 1782 nt6.18□□□□□ -1.42
UBP3Q01477 PMT5YDL093W 2232 nt6.18□□□□□ -1.42
UBP3Q01477 MPH2YDL247W 1830 nt6.18□□□□□ -1.42
UBP3Q01477 RPL7AYGL076C 735 nt6.17□□□□□ -1.42
UBP3Q01477 KXD1YGL079W 657 nt6.17□□□□□ -1.42
UBP3Q01477 YIL089WYIL089W 618 nt6.17□□□□□ -1.42
UBP3Q01477 SFH5YJL145W 885 nt6.17□□□□□ -1.42
UBP3Q01477 SFK1YKL051W 1062 nt6.17□□□□□ -1.42 RIP-Chip
UBP3Q01477 CUS2YNL286W 858 nt6.17□□□□□ -1.42
UBP3Q01477 REX4YOL080C 870 nt6.17□□□□□ -1.42
UBP3Q01477 RPL7BYPL198W 735 nt6.17□□□□□ -1.42 RIP-Chip
UBP3Q01477 ADY3YDL239C 2373 nt6.16□□□□□ -1.42
UBP3Q01477 BUD30YDL151C 582 nt6.16□□□□□ -1.42
UBP3Q01477 TRS23YDR246W 660 nt6.16□□□□□ -1.42 RIP-Chip
UBP3Q01477 YER186CYER186C 921 nt6.16□□□□□ -1.42
UBP3Q01477 APS3YJL024C 585 nt6.16□□□□□ -1.42
UBP3Q01477 POL32YJR043C 1053 nt6.16□□□□□ -1.42
UBP3Q01477 TIS11YLR136C 858 nt6.16□□□□□ -1.42
UBP3Q01477 IPP1YBR011C 864 nt6.16□□□□□ -1.42 RIP-Chip
UBP3Q01477 CPA1YOR303W 1236 nt6.16□□□□□ -1.42
UBP3Q01477 BSD2YBR290W 966 nt6.16□□□□□ -1.42
UBP3Q01477 CLN2YPL256C 1638 nt6.16□□□□□ -1.42 RIP-Chip
UBP3Q01477 HSP104YLL026W 2727 nt6.16□□□□□ -1.42 RIP-Chip
UBP3Q01477 snR63snR63 255 nt6.15□□□□□ -1.42
UBP3Q01477 YFL041W-AYFL041W-A 192 nt6.15□□□□□ -1.42
UBP3Q01477 YFR057WYFR057W 456 nt6.15□□□□□ -1.42
UBP3Q01477 SEN34YAR008W 828 nt6.15□□□□□ -1.42
UBP3Q01477 SPC3YLR066W 555 nt6.15□□□□□ -1.42
UBP3Q01477 YMR245WYMR245W 621 nt6.15□□□□□ -1.42
UBP3Q01477 YNR025CYNR025C 360 nt6.15□□□□□ -1.42
UBP3Q01477 CPR8YNR028W 927 nt6.15□□□□□ -1.42
UBP3Q01477 CKB2YOR039W 777 nt6.15□□□□□ -1.42
UBP3Q01477 AMD1YML035C 2433 nt6.15□□□□□ -1.43
UBP3Q01477 YLR108CYLR108C 1458 nt6.15□□□□□ -1.43 RIP-Chip
UBP3Q01477 YFL042CYFL042C 2025 nt6.15□□□□□ -1.43
UBP3Q01477 EBP2YKL172W 1284 nt6.14□□□□□ -1.43
UBP3Q01477 ATG16YMR159C 453 nt6.14□□□□□ -1.43
UBP3Q01477 PGA2YNL149C 390 nt6.14□□□□□ -1.43
UBP3Q01477 ATG14YBR128C 1035 nt6.14□□□□□ -1.43
UBP3Q01477 YIR007WYIR007W 2295 nt6.14□□□□□ -1.43
UBP3Q01477 GUA1YMR217W 1578 nt6.14□□□□□ -1.43
UBP3Q01477 YEH1YLL012W 1722 nt6.13□□□□□ -1.43
UBP3Q01477 PEF1YGR058W 1008 nt6.13□□□□□ -1.43
UBP3Q01477 SPO11YHL022C 1197 nt6.13□□□□□ -1.43
UBP3Q01477 CDC8YJR057W 651 nt6.13□□□□□ -1.43 RIP-Chip
UBP3Q01477 SNO4YMR322C 714 nt6.13□□□□□ -1.43 RIP-Chip
UBP3Q01477 YOR200WYOR200W 399 nt6.13□□□□□ -1.43
UBP3Q01477 HSP33YOR391C 714 nt6.13□□□□□ -1.43
UBP3Q01477 HSP32YPL280W 714 nt6.13□□□□□ -1.43
UBP3Q01477 RPN7YPR108W 1290 nt6.13□□□□□ -1.43
UBP3Q01477 PHO12YHR215W 1404 nt6.13□□□□□ -1.43 RIP-Chip
UBP3Q01477 MTC1YJL123C 1437 nt6.13□□□□□ -1.43
UBP3Q01477 PHO11YAR071W 1404 nt6.13□□□□□ -1.43
UBP3Q01477 PUF3YLL013C 2640 nt6.12□□□□□ -1.43
UBP3Q01477 CBS1YDL069C 690 nt6.12□□□□□ -1.43
UBP3Q01477 LDB17YDL146W 1476 nt6.12□□□□□ -1.43
UBP3Q01477 COS7YDL248W 1152 nt6.12□□□□□ -1.43
UBP3Q01477 DOS2YDR068W 933 nt6.12□□□□□ -1.43
UBP3Q01477 RPN9YDR427W 1182 nt6.12□□□□□ -1.43
UBP3Q01477 STE2YFL026W 1296 nt6.12□□□□□ -1.43
UBP3Q01477 COS4YFL062W 1140 nt6.12□□□□□ -1.43 RIP-Chip
UBP3Q01477 ERJ5YFR041C 888 nt6.12□□□□□ -1.43
UBP3Q01477 YGR015CYGR015C 987 nt6.12□□□□□ -1.43
UBP3Q01477 CLB1YGR108W 1416 nt6.12□□□□□ -1.43
UBP3Q01477 SCEIQ0160 708 nt6.12□□□□□ -1.43
UBP3Q01477 COS5YJR161C 1152 nt6.12□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms