Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
UBE2AP49459 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2AP49459 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 ATP5G2P3-201ENST00000429083 425 ntBASIC14.28□□□□□ -0.12
UBE2AP49459 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.28□□□□□ -0.12
UBE2AP49459 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2AP49459 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
UBE2AP49459 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2AP49459 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2AP49459 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
UBE2AP49459 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2AP49459 TSPY13P-201ENST00000338964 914 ntBASIC14.27□□□□□ -0.13
UBE2AP49459 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2AP49459 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2AP49459 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2AP49459 AC011551.1-201ENST00000614101 683 ntBASIC14.27□□□□□ -0.13
UBE2AP49459 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2AP49459 AC074183.2-201ENST00000623112 922 ntBASIC14.27□□□□□ -0.13
UBE2AP49459 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2AP49459 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2AP49459 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBE2AP49459 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UBE2AP49459 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 AC004987.1-201ENST00000428627 508 ntBASIC14.26□□□□□ -0.13
UBE2AP49459 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2AP49459 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2AP49459 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2AP49459 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.25□□□□□ -0.13
UBE2AP49459 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBE2AP49459 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
UBE2AP49459 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.25□□□□□ -0.13
UBE2AP49459 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBE2AP49459 AC019171.1-201ENST00000601251 1056 ntBASIC14.25□□□□□ -0.13
UBE2AP49459 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 AC012354.3-201ENST00000623734 483 ntBASIC14.25□□□□□ -0.13
UBE2AP49459 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
UBE2AP49459 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2AP49459 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2AP49459 ABCB10P4-201ENST00000566803 2184 ntBASIC14.24□□□□□ -0.13
UBE2AP49459 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBE2AP49459 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBE2AP49459 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
UBE2AP49459 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 AC004812.2-201ENST00000611079 2094 ntBASIC14.24□□□□□ -0.13
UBE2AP49459 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2AP49459 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2AP49459 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms