Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 RPL15BYMR121C 615 nt4.04□□□□□ -1.76
CUP9P41817 YNL165WYNL165W 1221 nt4.04□□□□□ -1.76
CUP9P41817 MRP21YBL090W 534 nt4.04□□□□□ -1.76
CUP9P41817 FAA3YIL009W 2085 nt4.04□□□□□ -1.76
CUP9P41817 CRT10YOL063C 2874 nt4.04□□□□□ -1.76
CUP9P41817 YMD8YML038C 1329 nt4.03□□□□□ -1.76
CUP9P41817 TAF5YBR198C 2397 nt4.03□□□□□ -1.76
CUP9P41817 GAL4YPL248C 2646 nt4.03□□□□□ -1.76
CUP9P41817 SKG3YLR187W 3081 nt4.03□□□□□ -1.76
CUP9P41817 FRA2YGL220W 363 nt4.03□□□□□ -1.76
CUP9P41817 RMR1YGL250W 726 nt4.03□□□□□ -1.76
CUP9P41817 YHR212W-AYHR212W-A 204 nt4.03□□□□□ -1.76
CUP9P41817 YAR061WYAR061W 204 nt4.03□□□□□ -1.76
CUP9P41817 SPN1YPR133C 1233 nt4.03□□□□□ -1.76
CUP9P41817 RAD28YDR030C 1521 nt4.03□□□□□ -1.76
CUP9P41817 FOX2YKR009C 2703 nt4.03□□□□□ -1.76
CUP9P41817 TSL1YML100W 3297 nt4.03□□□□□ -1.77
CUP9P41817 MPS3YJL019W 2049 nt4.02□□□□□ -1.77
CUP9P41817 TFC7YOR110W 1308 nt4.02□□□□□ -1.77
CUP9P41817 LSO1YJR005C-A 282 nt4.02□□□□□ -1.77
CUP9P41817 CNB1YKL190W 528 nt4.02□□□□□ -1.77
CUP9P41817 NPT1YOR209C 1290 nt4.02□□□□□ -1.77
CUP9P41817 MET12YPL023C 1974 nt4.02□□□□□ -1.77
CUP9P41817 RAD57YDR004W 1383 nt4.02□□□□□ -1.77
CUP9P41817 TDA7YNL176C 1911 nt4.01□□□□□ -1.77
CUP9P41817 CLF1YLR117C 2064 nt4.01□□□□□ -1.77
CUP9P41817 RPS16BYDL083C 432 nt4.01□□□□□ -1.77
CUP9P41817 NPY1YGL067W 1155 nt4.01□□□□□ -1.77
CUP9P41817 YLR157W-DYLR157W-D 213 nt4.01□□□□□ -1.77
CUP9P41817 YOR379CYOR379C 339 nt4.01□□□□□ -1.77
CUP9P41817 NUP1YOR098C 3231 nt4.01□□□□□ -1.77
CUP9P41817 PCA1YBR295W 3651 nt4.01□□□□□ -1.77
CUP9P41817 FZO1YBR179C 2568 nt4.01□□□□□ -1.77
CUP9P41817 RAD16YBR114W 2373 nt4□□□□□ -1.77
CUP9P41817 MSC2YDR205W 2175 nt4□□□□□ -1.77
CUP9P41817 BLM10YFL007W 6432 nt4□□□□□ -1.77
CUP9P41817 STP4YDL048C 1473 nt4□□□□□ -1.77
CUP9P41817 YGL088WYGL088W 366 nt4□□□□□ -1.77
CUP9P41817 TYS1YGR185C 1185 nt4□□□□□ -1.77
CUP9P41817 RER1YCL001W 567 nt4□□□□□ -1.77
CUP9P41817 PGM2YMR105C 1710 nt4□□□□□ -1.77
CUP9P41817 HNT2YDR305C 654 nt3.99□□□□□ -1.77
CUP9P41817 MPP10YJR002W 1782 nt3.99□□□□□ -1.77
CUP9P41817 GDH2YDL215C 3279 nt3.99□□□□□ -1.77
CUP9P41817 ATR1YML116W 1629 nt3.99□□□□□ -1.77
CUP9P41817 CLA4YNL298W 2529 nt3.98□□□□□ -1.77
CUP9P41817 GIP2YER054C 1647 nt3.98□□□□□ -1.77
CUP9P41817 BOP2YLR267W 1713 nt3.98□□□□□ -1.77
CUP9P41817 EUG1YDR518W 1554 nt3.97□□□□□ -1.77
CUP9P41817 PDR12YPL058C 4536 nt3.97□□□□□ -1.77
CUP9P41817 YDR133CYDR133C 336 nt3.97□□□□□ -1.77
CUP9P41817 COQ4YDR204W 1008 nt3.97□□□□□ -1.77
CUP9P41817 YHR193C-AYHR193C-A 375 nt3.97□□□□□ -1.77
CUP9P41817 RPS4BYHR203C 786 nt3.97□□□□□ -1.77
CUP9P41817 RPS4AYJR145C 786 nt3.97□□□□□ -1.77
CUP9P41817 COG5YNL051W 1212 nt3.97□□□□□ -1.77
CUP9P41817 GWT1YJL091C 1473 nt3.97□□□□□ -1.77
CUP9P41817 TFG1YGR186W 2208 nt3.97□□□□□ -1.77
CUP9P41817 YEL045CYEL045C 426 nt3.96□□□□□ -1.78
CUP9P41817 YGR016WYGR016W 573 nt3.96□□□□□ -1.78
CUP9P41817 RFU1YLR073C 603 nt3.96□□□□□ -1.78
CUP9P41817 CSR1YLR380W 1227 nt3.96□□□□□ -1.78
CUP9P41817 TGS1YPL157W 948 nt3.96□□□□□ -1.78
CUP9P41817 SUM1YDR310C 3189 nt3.96□□□□□ -1.78
CUP9P41817 PEX29YDR479C 1665 nt3.96□□□□□ -1.78
CUP9P41817 ADY3YDL239C 2373 nt3.96□□□□□ -1.78
CUP9P41817 SUL2YLR092W 2682 nt3.96□□□□□ -1.78
CUP9P41817 YMR221CYMR221C 1515 nt3.95□□□□□ -1.78
CUP9P41817 SAP155YFR040W 3009 nt3.95□□□□□ -1.78
CUP9P41817 FRE1YLR214W 2061 nt3.95□□□□□ -1.78
CUP9P41817 KRS1YDR037W 1776 nt3.95□□□□□ -1.78
CUP9P41817 YAL047W-AYAL047W-A 330 nt3.95□□□□□ -1.78
CUP9P41817 MRPL20YKR085C 588 nt3.95□□□□□ -1.78
CUP9P41817 MSE1YOL033W 1611 nt3.95□□□□□ -1.78
CUP9P41817 GCR1YPL075W 2358 nt3.95□□□□□ -1.78
CUP9P41817 AKL1YBR059C 3327 nt3.95□□□□□ -1.78
CUP9P41817 ABF1YKL112W 2196 nt3.95□□□□□ -1.78
CUP9P41817 MOT2YER068W 1764 nt3.94□□□□□ -1.78
CUP9P41817 YLH47YPR125W 1365 nt3.94□□□□□ -1.78
CUP9P41817 YDR545C-AYDR545C-A 480 nt3.94□□□□□ -1.78
CUP9P41817 UBC8YEL012W 657 nt3.94□□□□□ -1.78
CUP9P41817 YEL077W-AYEL077W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 PIC2YER053C 903 nt3.94□□□□□ -1.78
CUP9P41817 RPL34AYER056C-A 366 nt3.94□□□□□ -1.78
CUP9P41817 YER190C-BYER190C-B 483 nt3.94□□□□□ -1.78
CUP9P41817 YFL068WYFL068W 483 nt3.94□□□□□ -1.78
CUP9P41817 YGR296C-BYGR296C-B 483 nt3.94□□□□□ -1.78
CUP9P41817 YHL050W-AYHL050W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YHR219C-AYHR219C-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YIL177W-AYIL177W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YIR017W-AYIR017W-A 600 nt3.94□□□□□ -1.78
CUP9P41817 YJL225W-AYJL225W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 FMP46YKR049C 402 nt3.94□□□□□ -1.78
CUP9P41817 YLL066W-AYLL066W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YLL067W-AYLL067W-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YLR466C-AYLR466C-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YLR467C-AYLR467C-A 483 nt3.94□□□□□ -1.78
CUP9P41817 YML133W-BYML133W-B 483 nt3.94□□□□□ -1.78
CUP9P41817 YNL339W-BYNL339W-B 483 nt3.94□□□□□ -1.78
CUP9P41817 BUD17YNR027W 954 nt3.94□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 24 ms