Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 UBI4YLL039C 1146 nt8.84□□□□□ -0.99
UBP9P39967 INN1YNL152W 1230 nt8.84□□□□□ -0.99
UBP9P39967 ATP23YNR020C 813 nt8.84□□□□□ -0.99
UBP9P39967 NTG2YOL043C 1143 nt8.84□□□□□ -0.99
UBP9P39967 TIM50YPL063W 1431 nt8.84□□□□□ -0.99
UBP9P39967 YOS9YDR057W 1629 nt8.83□□□□□ -1
UBP9P39967 MEP1YGR121C 1479 nt8.83□□□□□ -1
UBP9P39967 NFI1YOR156C 2181 nt8.83□□□□□ -1
UBP9P39967 YPL247CYPL247C 1572 nt8.83□□□□□ -1
UBP9P39967 PMU1YKL128C 888 nt8.83□□□□□ -1
UBP9P39967 YLL017WYLL017W 312 nt8.83□□□□□ -1
UBP9P39967 NCE103YNL036W 666 nt8.83□□□□□ -1
UBP9P39967 IZH2YOL002C 954 nt8.83□□□□□ -1
UBP9P39967 PSP2YML017W 1782 nt8.82□□□□□ -1
UBP9P39967 YDR476CYDR476C 675 nt8.82□□□□□ -1
UBP9P39967 IES5YER092W 378 nt8.82□□□□□ -1
UBP9P39967 THI5YFL058W 1023 nt8.82□□□□□ -1
UBP9P39967 SFC1YJR095W 969 nt8.82□□□□□ -1
UBP9P39967 PIR3YKL163W 978 nt8.82□□□□□ -1
UBP9P39967 YNL235CYNL235C 432 nt8.82□□□□□ -1
UBP9P39967 RER2YBR002C 861 nt8.82□□□□□ -1
UBP9P39967 MCA1YOR197W 1299 nt8.82□□□□□ -1
UBP9P39967 DAP1YPL170W 459 nt8.82□□□□□ -1
UBP9P39967 CLB2YPR119W 1476 nt8.82□□□□□ -1
UBP9P39967 RGI1YER067W 486 nt8.81□□□□□ -1
UBP9P39967 TAM41YGR046W 1158 nt8.81□□□□□ -1
UBP9P39967 RSM27YGR215W 333 nt8.81□□□□□ -1
UBP9P39967 MAM33YIL070C 801 nt8.81□□□□□ -1
UBP9P39967 NCA3YJL116C 1014 nt8.81□□□□□ -1
UBP9P39967 MRP17YKL003C 396 nt8.81□□□□□ -1
UBP9P39967 BLI1YKL061W 342 nt8.81□□□□□ -1
UBP9P39967 OSW5YMR148W 447 nt8.81□□□□□ -1
UBP9P39967 PRE10YOR362C 867 nt8.81□□□□□ -1
UBP9P39967 CSM4YPL200W 471 nt8.81□□□□□ -1
UBP9P39967 YKR023WYKR023W 1593 nt8.81□□□□□ -1
UBP9P39967 PET112YBL080C 1626 nt8.8□□□□□ -1
UBP9P39967 THI6YPL214C 1623 nt8.8□□□□□ -1
UBP9P39967 HAC1YFL031W 717 nt8.8□□□□□ -1
UBP9P39967 CIR1YGR207C 786 nt8.8□□□□□ -1
UBP9P39967 YGR291CYGR291C 222 nt8.8□□□□□ -1
UBP9P39967 YMR294W-AYMR294W-A 360 nt8.8□□□□□ -1
UBP9P39967 INP54YOL065C 1155 nt8.8□□□□□ -1
UBP9P39967 SUA7YPR086W 1038 nt8.8□□□□□ -1
UBP9P39967 RRT2YBR246W 1164 nt8.8□□□□□ -1
UBP9P39967 YBR298C-AYBR298C-A 222 nt8.8□□□□□ -1
UBP9P39967 ATG23YLR431C 1362 nt8.8□□□□□ -1
UBP9P39967 CBP2YHL038C 1893 nt8.8□□□□□ -1
UBP9P39967 HXT8YJL214W 1710 nt8.8□□□□□ -1
UBP9P39967 KNH1YDL049C 807 nt8.79□□□□□ -1
UBP9P39967 YDR510C-AYDR510C-A 117 nt8.79□□□□□ -1
UBP9P39967 HRI1YLR301W 735 nt8.79□□□□□ -1
UBP9P39967 MRPL10YNL284C 969 nt8.79□□□□□ -1
UBP9P39967 LEM3YNL323W 1245 nt8.79□□□□□ -1
UBP9P39967 HUB1YNR032C-A 222 nt8.79□□□□□ -1
UBP9P39967 RPB5YBR154C 648 nt8.79□□□□□ -1
UBP9P39967 PES4YFR023W 1836 nt8.79□□□□□ -1
UBP9P39967 CIT1YNR001C 1440 nt8.79□□□□□ -1
UBP9P39967 LRO1YNR008W 1986 nt8.79□□□□□ -1
UBP9P39967 PEX31YGR004W 1389 nt8.78□□□□□ -1
UBP9P39967 YHL030W-AYHL030W-A 462 nt8.78□□□□□ -1
UBP9P39967 LIA1YJR070C 978 nt8.78□□□□□ -1
UBP9P39967 YLR400WYLR400W 474 nt8.78□□□□□ -1
UBP9P39967 YMR031W-AYMR031W-A 327 nt8.78□□□□□ -1
UBP9P39967 CYT1YOR065W 930 nt8.78□□□□□ -1
UBP9P39967 snR19snR19 568 nt8.78□□□□□ -1
UBP9P39967 MAE1YKL029C 2010 nt8.78□□□□□ -1
UBP9P39967 SAL1YNL083W 1485 nt8.77□□□□□ -1
UBP9P39967 MEI4YER044C-A 1227 nt8.77□□□□□ -1.01
UBP9P39967 COS4YFL062W 1140 nt8.77□□□□□ -1.01
UBP9P39967 EGD2YHR193C 525 nt8.77□□□□□ -1.01
UBP9P39967 YIL177W-AYIL177W-A 483 nt8.77□□□□□ -1.01
UBP9P39967 YJL225W-AYJL225W-A 483 nt8.77□□□□□ -1.01
UBP9P39967 GAB1YLR459W 1185 nt8.77□□□□□ -1.01
UBP9P39967 YPR127WYPR127W 1038 nt8.77□□□□□ -1.01
UBP9P39967 HMG2YLR450W 3138 nt8.77□□□□□ -1.01
UBP9P39967 ESBP6YNL125C 2022 nt8.76□□□□□ -1.01
UBP9P39967 HNT1YDL125C 477 nt8.76□□□□□ -1.01
UBP9P39967 GGC1YDL198C 903 nt8.76□□□□□ -1.01
UBP9P39967 PET100YDR079W 336 nt8.76□□□□□ -1.01
UBP9P39967 YCL021W-AYCL021W-A 378 nt8.76□□□□□ -1.01
UBP9P39967 DIA4YHR011W 1341 nt8.76□□□□□ -1.01
UBP9P39967 TPO4YOR273C 1980 nt8.75□□□□□ -1.01
UBP9P39967 YNL295WYNL295W 1575 nt8.75□□□□□ -1.01
UBP9P39967 BET1YIL004C 429 nt8.75□□□□□ -1.01
UBP9P39967 LOH1YJL038C 660 nt8.75□□□□□ -1.01
UBP9P39967 AHP1YLR109W 531 nt8.75□□□□□ -1.01
UBP9P39967 MSO1YNR049C 633 nt8.75□□□□□ -1.01
UBP9P39967 YGK3YOL128C 1128 nt8.75□□□□□ -1.01
UBP9P39967 MEI5YPL121C 669 nt8.75□□□□□ -1.01
UBP9P39967 YPL225WYPL225W 441 nt8.75□□□□□ -1.01
UBP9P39967 MRPS5YBR251W 924 nt8.75□□□□□ -1.01
UBP9P39967 MTO1YGL236C 2010 nt8.75□□□□□ -1.01
UBP9P39967 RRP43YCR035C 1185 nt8.74□□□□□ -1.01
UBP9P39967 YGR270C-AYGR270C-A 219 nt8.74□□□□□ -1.01
UBP9P39967 SDP1YIL113W 630 nt8.74□□□□□ -1.01
UBP9P39967 HRT3YLR097C 1035 nt8.74□□□□□ -1.01
UBP9P39967 YLR358CYLR358C 564 nt8.74□□□□□ -1.01
UBP9P39967 CPT1YNL130C 1182 nt8.74□□□□□ -1.01
UBP9P39967 CUR1YPR158W 759 nt8.74□□□□□ -1.01
UBP9P39967 YRF1-2YER190W 5046 nt8.73□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms