Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YNL174WYNL174W 573 nt5.25□□□□□ -1.57
TDP1P38319 DPH2YKL191W 1605 nt5.25□□□□□ -1.57
TDP1P38319 KCH1YJR054W 1494 nt5.25□□□□□ -1.57
TDP1P38319 BRF1YGR246C 1791 nt5.24□□□□□ -1.57
TDP1P38319 CLA4YNL298W 2529 nt5.24□□□□□ -1.57
TDP1P38319 YCR100CYCR100C 951 nt5.24□□□□□ -1.57
TDP1P38319 RRG1YDR065W 1098 nt5.24□□□□□ -1.57
TDP1P38319 YDR249CYDR249C 1122 nt5.24□□□□□ -1.57
TDP1P38319 YDR445CYDR445C 408 nt5.24□□□□□ -1.57
TDP1P38319 MOB2YFL034C-B 864 nt5.24□□□□□ -1.57
TDP1P38319 VAM7YGL212W 951 nt5.24□□□□□ -1.57
TDP1P38319 VMA16YHR026W 642 nt5.24□□□□□ -1.57
TDP1P38319 SPO7YAL009W 780 nt5.24□□□□□ -1.57
TDP1P38319 PRS1YKL181W 1284 nt5.24□□□□□ -1.57
TDP1P38319 YMR181CYMR181C 465 nt5.24□□□□□ -1.57
TDP1P38319 RPL3YOR063W 1164 nt5.24□□□□□ -1.57
TDP1P38319 ENV9YOR246C 993 nt5.24□□□□□ -1.57
TDP1P38319 ECM8YBR076W 1065 nt5.24□□□□□ -1.57
TDP1P38319 UBC4YBR082C 447 nt5.24□□□□□ -1.57
TDP1P38319 snR3snR3 194 nt5.24□□□□□ -1.57
TDP1P38319 SNT2YGL131C 4212 nt5.24□□□□□ -1.57
TDP1P38319 FRE3YOR381W 2136 nt5.24□□□□□ -1.57
TDP1P38319 MTF2YDL044C 1323 nt5.23□□□□□ -1.57
TDP1P38319 FOL1YNL256W 2475 nt5.23□□□□□ -1.57
TDP1P38319 ATE1YGL017W 1512 nt5.23□□□□□ -1.57
TDP1P38319 YIL067CYIL067C 2037 nt5.23□□□□□ -1.57
TDP1P38319 YDR154CYDR154C 351 nt5.23□□□□□ -1.57
TDP1P38319 YGR273CYGR273C 525 nt5.23□□□□□ -1.57
TDP1P38319 PAN5YHR063C 1140 nt5.23□□□□□ -1.57
TDP1P38319 IMP3YHR148W 552 nt5.23□□□□□ -1.57
TDP1P38319 EST3YIL009C-A 546 nt5.23□□□□□ -1.57
TDP1P38319 YUH1YJR099W 711 nt5.23□□□□□ -1.57
TDP1P38319 RPS31YLR167W 459 nt5.23□□□□□ -1.57
TDP1P38319 ORM2YLR350W 651 nt5.23□□□□□ -1.57
TDP1P38319 SLT2YHR030C 1455 nt5.23□□□□□ -1.57
TDP1P38319 UBP7YIL156W 3216 nt5.23□□□□□ -1.57
TDP1P38319 TFG1YGR186W 2208 nt5.23□□□□□ -1.57
TDP1P38319 BIT2YBR270C 1638 nt5.23□□□□□ -1.57
TDP1P38319 CTS2YDR371W 1536 nt5.23□□□□□ -1.57
TDP1P38319 CBP1YJL209W 1965 nt5.22□□□□□ -1.57
TDP1P38319 IMA1YGR287C 1770 nt5.22□□□□□ -1.57
TDP1P38319 PAN6YIL145C 930 nt5.22□□□□□ -1.57
TDP1P38319 YIR021W-AYIR021W-A 213 nt5.22□□□□□ -1.57
TDP1P38319 LAC1YKL008C 1257 nt5.22□□□□□ -1.57
TDP1P38319 SEC13YLR208W 894 nt5.22□□□□□ -1.57
TDP1P38319 YBL036CYBL036C 774 nt5.22□□□□□ -1.57
TDP1P38319 SPS18YNL204C 903 nt5.22□□□□□ -1.57
TDP1P38319 TLG2YOL018C 1194 nt5.22□□□□□ -1.57
TDP1P38319 SRL4YPL033C 846 nt5.22□□□□□ -1.57
TDP1P38319 UBA2YDR390C 1911 nt5.22□□□□□ -1.57
TDP1P38319 NUD1YOR373W 2556 nt5.22□□□□□ -1.57
TDP1P38319 MET3YJR010W 1536 nt5.22□□□□□ -1.57
TDP1P38319 PUF3YLL013C 2640 nt5.22□□□□□ -1.57
TDP1P38319 VMA13YPR036W 1437 nt5.22□□□□□ -1.57
TDP1P38319 QDR1YIL120W 1692 nt5.21□□□□□ -1.57
TDP1P38319 HOF1YMR032W 2010 nt5.21□□□□□ -1.57
TDP1P38319 IBA57YJR122W 1494 nt5.21□□□□□ -1.58
TDP1P38319 YDR220CYDR220C 294 nt5.21□□□□□ -1.58
TDP1P38319 GIC2YDR309C 1152 nt5.21□□□□□ -1.58
TDP1P38319 IRC6YFR043C 714 nt5.21□□□□□ -1.58
TDP1P38319 DSD1YGL196W 1287 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)CtN(GUU)C 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)FtN(GUU)F 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)GtN(GUU)G 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)KtN(GUU)K 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)LtN(GUU)L 74 nt5.21□□□□□ -1.58
TDP1P38319 POP6YGR030C 477 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)N1tN(GUU)N1 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)N2tN(GUU)N2 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)O1tN(GUU)O1 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)O2tN(GUU)O2 74 nt5.21□□□□□ -1.58
TDP1P38319 tN(GUU)PtN(GUU)P 74 nt5.21□□□□□ -1.58
TDP1P38319 CIR1YGR207C 786 nt5.21□□□□□ -1.58
TDP1P38319 YLR407WYLR407W 687 nt5.21□□□□□ -1.58
TDP1P38319 TAP42YMR028W 1101 nt5.21□□□□□ -1.58
TDP1P38319 YNL217WYNL217W 981 nt5.21□□□□□ -1.58
TDP1P38319 IZH4YOL101C 939 nt5.21□□□□□ -1.58
TDP1P38319 SMA1YPL027W 738 nt5.21□□□□□ -1.58
TDP1P38319 COX11YPL132W 903 nt5.21□□□□□ -1.58
TDP1P38319 YPR195CYPR195C 330 nt5.21□□□□□ -1.58
TDP1P38319 YDR034C-CYDR034C-C 1317 nt5.21□□□□□ -1.58
TDP1P38319 DEG1YFL001W 1329 nt5.21□□□□□ -1.58
TDP1P38319 YLR410W-AYLR410W-A 1317 nt5.21□□□□□ -1.58
TDP1P38319 YMD8YML038C 1329 nt5.21□□□□□ -1.58
TDP1P38319 TEC1YBR083W 1461 nt5.2□□□□□ -1.58
TDP1P38319 DON1YDR273W 1098 nt5.2□□□□□ -1.58
TDP1P38319 YIL028WYIL028W 399 nt5.2□□□□□ -1.58
TDP1P38319 RSM26YJR101W 801 nt5.2□□□□□ -1.58
TDP1P38319 CPR6YLR216C 1116 nt5.2□□□□□ -1.58
TDP1P38319 SNO1YMR095C 675 nt5.2□□□□□ -1.58
TDP1P38319 MRL1YPR079W 1146 nt5.2□□□□□ -1.58
TDP1P38319 SIS2YKR072C 1689 nt5.2□□□□□ -1.58
TDP1P38319 GEP3YOR205C 1671 nt5.2□□□□□ -1.58
TDP1P38319 HSE1YHL002W 1359 nt5.19□□□□□ -1.58
TDP1P38319 PDR16YNL231C 1056 nt5.19□□□□□ -1.58
TDP1P38319 CUS2YNL286W 858 nt5.19□□□□□ -1.58
TDP1P38319 LEM3YNL323W 1245 nt5.19□□□□□ -1.58
TDP1P38319 YOR024WYOR024W 324 nt5.19□□□□□ -1.58
TDP1P38319 CKA2YOR061W 1020 nt5.19□□□□□ -1.58
TDP1P38319 YOR097CYOR097C 528 nt5.19□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms