Protein–RNA interactions for Protein: P38264

PHO88, SRP-independent targeting protein 3, yeast

Predicted RBP Predictions only

Length 188 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	P38264	IMA3	YIL172C	1770 nt		4.63	□□□□□ -1.67
PHO88	P38264	IMA4	YJL221C	1770 nt		4.63	□□□□□ -1.67
PHO88	P38264	FLC3	YGL139W	2409 nt		4.63	□□□□□ -1.67
PHO88	P38264	MAL11	YGR289C	1851 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)C	tK(CUU)C	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)D1	tK(CUU)D1	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)D2	tK(CUU)D2	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)E1	tK(CUU)E1	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)E2	tK(CUU)E2	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)F	tK(CUU)F	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)G1	tK(CUU)G1	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)G2	tK(CUU)G2	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)G3	tK(CUU)G3	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)I	tK(CUU)I	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)J	tK(CUU)J	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)K	tK(CUU)K	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)M	tK(CUU)M	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tK(CUU)P	tK(CUU)P	73 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)C	tQ(UUG)C	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)D1	tQ(UUG)D1	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)D2	tQ(UUG)D2	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)D3	tQ(UUG)D3	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)E1	tQ(UUG)E1	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)H	tQ(UUG)H	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	tQ(UUG)L	tQ(UUG)L	72 nt		4.63	□□□□□ -1.67
PHO88	P38264	PER33	YLR064W	822 nt		4.63	□□□□□ -1.67
PHO88	P38264	YPL041C	YPL041C	624 nt		4.63	□□□□□ -1.67
PHO88	P38264	COX11	YPL132W	903 nt		4.63	□□□□□ -1.67
PHO88	P38264	VPS69	YPR087W	321 nt		4.63	□□□□□ -1.67
PHO88	P38264	PAH1	YMR165C	2589 nt		4.63	□□□□□ -1.67
PHO88	P38264	VBA1	YMR088C	1689 nt		4.63	□□□□□ -1.67
PHO88	P38264	ASN1	YPR145W	1719 nt		4.63	□□□□□ -1.67
PHO88	P38264	BUD8	YLR353W	1812 nt		4.62	□□□□□ -1.67
PHO88	P38264	GUP2	YPL189W	1830 nt		4.62	□□□□□ -1.67
PHO88	P38264	AIM21	YIR003W	2040 nt		4.62	□□□□□ -1.67
PHO88	P38264	CPR1	YDR155C	489 nt		4.62	□□□□□ -1.67
PHO88	P38264	AAD6	YFL056C	639 nt		4.62	□□□□□ -1.67
PHO88	P38264	RDN5-1	RDN5-1	121 nt		4.62	□□□□□ -1.67
PHO88	P38264	RDN5-6	RDN5-6	121 nt		4.62	□□□□□ -1.67
PHO88	P38264	PAP2	YOL115W	1755 nt		4.62	□□□□□ -1.67
PHO88	P38264	CLA4	YNL298W	2529 nt		4.62	□□□□□ -1.67
PHO88	P38264	TRP1	YDR007W	675 nt		4.61	□□□□□ -1.67
PHO88	P38264	CNN1	YFR046C	1086 nt		4.61	□□□□□ -1.67
PHO88	P38264	BUD13	YGL174W	801 nt		4.61	□□□□□ -1.67
PHO88	P38264	YIL171W	YIL171W	330 nt		4.61	□□□□□ -1.67
PHO88	P38264	YJR096W	YJR096W	849 nt		4.61	□□□□□ -1.67
PHO88	P38264	HEK2	YBL032W	1146 nt		4.61	□□□□□ -1.67
PHO88	P38264	AVO1	YOL078W	3531 nt		4.6	□□□□□ -1.67
PHO88	P38264	YCR023C	YCR023C	1836 nt		4.6	□□□□□ -1.67
PHO88	P38264	YPL162C	YPL162C	822 nt		4.6	□□□□□ -1.67
PHO88	P38264	LAS1	YKR063C	1509 nt		4.6	□□□□□ -1.67
PHO88	P38264	HSP30	YCR021C	999 nt		4.59	□□□□□ -1.67
PHO88	P38264	RCR2	YDR003W	633 nt		4.59	□□□□□ -1.67
PHO88	P38264	YEL045C	YEL045C	426 nt		4.59	□□□□□ -1.67
PHO88	P38264	AAP1	YHR047C	2571 nt		4.59	□□□□□ -1.67
PHO88	P38264	DAL81	YIR023W	2913 nt		4.59	□□□□□ -1.67
PHO88	P38264	TVP38	YKR088C	1014 nt		4.59	□□□□□ -1.67
PHO88	P38264	SET5	YHR207C	1581 nt		4.58	□□□□□ -1.68
PHO88	P38264	CWC2	YDL209C	1020 nt		4.58	□□□□□ -1.68
PHO88	P38264	RAD27	YKL113C	1149 nt		4.58	□□□□□ -1.68
PHO88	P38264	EOS1	YNL080C	1101 nt		4.58	□□□□□ -1.68
PHO88	P38264	SUA7	YPR086W	1038 nt		4.58	□□□□□ -1.68
PHO88	P38264	ARC40	YBR234C	1155 nt		4.58	□□□□□ -1.68
PHO88	P38264	BRE4	YDL231C	3378 nt		4.58	□□□□□ -1.68
PHO88	P38264	ERG7	YHR072W	2196 nt		4.58	□□□□□ -1.68
PHO88	P38264	COP1	YDL145C	3606 nt		4.58	□□□□□ -1.68
PHO88	P38264	MTR10	YOR160W	2919 nt		4.57	□□□□□ -1.68
PHO88	P38264	NUP2	YLR335W	2163 nt		4.57	□□□□□ -1.68
PHO88	P38264	GPP1	YIL053W	753 nt		4.57	□□□□□ -1.68
PHO88	P38264	RSF1	YMR030W	1131 nt		4.57	□□□□□ -1.68
PHO88	P38264	RMI1	YPL024W	726 nt		4.57	□□□□□ -1.68
PHO88	P38264	SEC2	YNL272C	2280 nt		4.57	□□□□□ -1.68
PHO88	P38264	CWH43	YCR017C	2862 nt		4.56	□□□□□ -1.68
PHO88	P38264	BOP2	YLR267W	1713 nt		4.56	□□□□□ -1.68
PHO88	P38264	RMR1	YGL250W	726 nt		4.56	□□□□□ -1.68
PHO88	P38264	MRP4	YHL004W	1185 nt		4.56	□□□□□ -1.68
PHO88	P38264	YHR032C-A	YHR032C-A	120 nt		4.56	□□□□□ -1.68
PHO88	P38264	FUR1	YHR128W	651 nt		4.56	□□□□□ -1.68
PHO88	P38264	YML116W-A	YML116W-A	303 nt		4.56	□□□□□ -1.68
PHO88	P38264	MET4	YNL103W	2019 nt		4.56	□□□□□ -1.68
PHO88	P38264	YNR065C	YNR065C	3351 nt		4.55	□□□□□ -1.68
PHO88	P38264	LUC7	YDL087C	786 nt		4.55	□□□□□ -1.68
PHO88	P38264	IGO2	YHR132W-A	396 nt		4.55	□□□□□ -1.68
PHO88	P38264	SFK1	YKL051W	1062 nt		4.55	□□□□□ -1.68
PHO88	P38264	RDL2	YOR286W	450 nt		4.55	□□□□□ -1.68
PHO88	P38264	ECM33	YBR078W	1290 nt		4.55	□□□□□ -1.68
PHO88	P38264	SUE1	YPR151C	621 nt		4.55	□□□□□ -1.68
PHO88	P38264	AIP1	YMR092C	1848 nt		4.55	□□□□□ -1.68
PHO88	P38264	SIP5	YMR140W	1470 nt		4.55	□□□□□ -1.68
PHO88	P38264	CDC48	YDL126C	2508 nt		4.54	□□□□□ -1.68
PHO88	P38264	YDR056C	YDR056C	618 nt		4.54	□□□□□ -1.68
PHO88	P38264	LSB1	YGR136W	726 nt		4.54	□□□□□ -1.68
PHO88	P38264	MRP21	YBL090W	534 nt		4.54	□□□□□ -1.68
PHO88	P38264	NUP1	YOR098C	3231 nt		4.53	□□□□□ -1.68
PHO88	P38264	SSL1	YLR005W	1386 nt		4.53	□□□□□ -1.68
PHO88	P38264	KIN4	YOR233W	2403 nt		4.53	□□□□□ -1.68
PHO88	P38264	AHA1	YDR214W	1053 nt		4.53	□□□□□ -1.68
PHO88	P38264	MRM2	YGL136C	963 nt		4.53	□□□□□ -1.68
PHO88	P38264	YIM1	YMR152W	1098 nt		4.53	□□□□□ -1.68
PHO88	P38264	ODC2	YOR222W	924 nt		4.53	□□□□□ -1.68

Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms