Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CD40P25942 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.62■□□□□ 0.73
CD40P25942 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.62■□□□□ 0.73
CD40P25942 AC005837.3-201ENST00000612163 286 ntBASIC19.62■□□□□ 0.73
CD40P25942 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CD40P25942 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.62■□□□□ 0.73
CD40P25942 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 C17orf82-201ENST00000623772 1530 ntBASIC19.61■□□□□ 0.73
CD40P25942 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 AC135279.3-201ENST00000610945 1311 ntBASIC19.61■□□□□ 0.73
CD40P25942 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.61■□□□□ 0.73
CD40P25942 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD40P25942 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD40P25942 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40P25942 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CD40P25942 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.6■□□□□ 0.73
CD40P25942 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
CD40P25942 AC099791.2-201ENST00000605725 427 ntBASIC19.6■□□□□ 0.73
CD40P25942 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40P25942 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.6■□□□□ 0.73
CD40P25942 SYT6-210ENST00000641643 1587 ntBASIC19.6■□□□□ 0.73
CD40P25942 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD40P25942 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.59■□□□□ 0.73
CD40P25942 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CD40P25942 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.59■□□□□ 0.73
CD40P25942 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.59■□□□□ 0.73
CD40P25942 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.59■□□□□ 0.73
CD40P25942 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CD40P25942 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.59■□□□□ 0.73
CD40P25942 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CD40P25942 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD40P25942 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.58■□□□□ 0.73
CD40P25942 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD40P25942 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.58■□□□□ 0.73
CD40P25942 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD40P25942 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.58■□□□□ 0.72
CD40P25942 AC024257.2-201ENST00000549699 147 ntBASIC19.58■□□□□ 0.72
CD40P25942 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.58■□□□□ 0.72
CD40P25942 AC241377.3-202ENST00000626088 1088 ntBASIC19.58■□□□□ 0.72
CD40P25942 AC241585.3-202ENST00000628937 1088 ntBASIC19.58■□□□□ 0.72
CD40P25942 AC245100.8-202ENST00000629247 1058 ntBASIC19.58■□□□□ 0.72
CD40P25942 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD40P25942 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CD40P25942 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.57■□□□□ 0.72
CD40P25942 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.57■□□□□ 0.72
CD40P25942 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD40P25942 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CD40P25942 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.56■□□□□ 0.72
CD40P25942 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.56■□□□□ 0.72
CD40P25942 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 AC141586.4-201ENST00000624558 1573 ntBASIC19.56■□□□□ 0.72
CD40P25942 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD40P25942 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD40P25942 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD40P25942 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.55■□□□□ 0.72
CD40P25942 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD40P25942 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CD40P25942 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.55■□□□□ 0.72
CD40P25942 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.55■□□□□ 0.72
CD40P25942 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD40P25942 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD40P25942 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
CD40P25942 SERBP1P1-201ENST00000396021 1160 ntBASIC19.54■□□□□ 0.72
CD40P25942 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.54■□□□□ 0.72
CD40P25942 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD40P25942 LINC01124-201ENST00000409786 2117 ntBASIC19.54■□□□□ 0.72
CD40P25942 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD40P25942 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.54■□□□□ 0.72
CD40P25942 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms