Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 RARRES2P2-201ENST00000394842 485 ntBASIC19.41■□□□□ 0.7
VSIG8P0DPA2 DUX4L9-201ENST00000449051 1259 ntBASIC19.41■□□□□ 0.7
VSIG8P0DPA2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VSIG8P0DPA2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 LONRF2P2-201ENST00000439212 571 ntBASIC19.4■□□□□ 0.7
VSIG8P0DPA2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VSIG8P0DPA2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VSIG8P0DPA2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 ALDH1A3-203ENST00000557963 1670 ntBASIC19.39■□□□□ 0.69
VSIG8P0DPA2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 LINC00565-201ENST00000562710 2331 ntBASIC19.39■□□□□ 0.69
VSIG8P0DPA2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VSIG8P0DPA2 GUSBP5-202ENST00000510805 1989 ntBASIC19.38■□□□□ 0.69
VSIG8P0DPA2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSIG8P0DPA2 AC131274.2-201ENST00000580697 1507 ntBASIC19.38■□□□□ 0.69
VSIG8P0DPA2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VSIG8P0DPA2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VSIG8P0DPA2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VSIG8P0DPA2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSIG8P0DPA2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 AC011551.1-201ENST00000614101 683 ntBASIC19.35■□□□□ 0.69
VSIG8P0DPA2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 LINC00526-201ENST00000581067 1875 ntBASIC19.35■□□□□ 0.69
VSIG8P0DPA2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSIG8P0DPA2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
VSIG8P0DPA2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VSIG8P0DPA2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
VSIG8P0DPA2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.33■□□□□ 0.69
VSIG8P0DPA2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
VSIG8P0DPA2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VSIG8P0DPA2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms