Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YIL030W-AYIL030W-A 339 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 FIG1YBR040W 897 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 snR3snR3 194 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 RRP7YCL031C 894 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 YDR444WYDR444W 2064 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 BI3Q0115 1554 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 HRB1YNL004W 1365 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 TYR1YBR166C 1359 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 SPR3YGR059W 1539 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 OSM1YJR051W 1506 nt5.79□□□□□ -1.48
TY1A-ER1P0CX71 GYP8YFL027C 1494 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 PET100YDR079W 336 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 RPL27AYHR010W 411 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 UTP9YHR196W 1728 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 MDE1YJR024C 735 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 PRS1YKL181W 1284 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 SEC17YBL050W 879 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 TRM13YOL125W 1431 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 YPR145C-AYPR145C-A 237 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 TRS20YBR254C 528 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 EAR1YMR171C 1653 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 BCS1YDR375C 1371 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 FBP26YJL155C 1359 nt5.78□□□□□ -1.48
TY1A-ER1P0CX71 CBP1YJL209W 1965 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 HMLALPHA2YCL067C 633 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 RVS161YCR009C 798 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 MATALPHA2YCR039C 633 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 TGL2YDR058C 981 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 YER010CYER010C 705 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 YER133W-AYER133W-A 342 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 TYS1YGR185C 1185 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 YMR158C-AYMR158C-A 138 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 YOR111WYOR111W 699 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 TMA16YOR252W 537 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 HNT3YOR258W 654 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 RPS6AYPL090C 711 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 SEC62YPL094C 825 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 USV1YPL230W 1176 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 FDH2YPL275W 711 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 ARR3YPR201W 1215 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 RXT2YBR095C 1293 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 RPS6BYBR181C 711 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 PFK2YMR205C 2880 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 UTP5YDR398W 1932 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 RIX7YLL034C 2514 nt5.77□□□□□ -1.49
TY1A-ER1P0CX71 NGR1YBR212W 2019 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 ATP2YJR121W 1536 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)DtA(AGC)D 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)FtA(AGC)F 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)GtA(AGC)G 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)HtA(AGC)H 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)JtA(AGC)J 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)K1tA(AGC)K1 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)K2tA(AGC)K2 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)LtA(AGC)L 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 OCA6YDR067C 675 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)M1tA(AGC)M1 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)M2tA(AGC)M2 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 tA(AGC)PtA(AGC)P 73 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 MTC7YEL033W 420 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 HIS1YER055C 894 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 CYC3YAL039C 810 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 CMS1YLR003C 876 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 PFK27YOL136C 1194 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 YOR238WYOR238W 912 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 IPL1YPL209C 1104 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 EKI1YDR147W 1605 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 HXT15YDL245C 1704 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 HXT16YJR158W 1704 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 PCL8YPL219W 1479 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 KEL1YHR158C 3495 nt5.76□□□□□ -1.49
TY1A-ER1P0CX71 RPT2YDL007W 1314 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 RSM28YDR494W 1086 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 URA3YEL021W 804 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 PAU17YLL025W 375 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 DLT1YMR126C 1029 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 MIC27YNL100W 705 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 RER2YBR002C 861 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 DCI1YOR180C 816 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 YOR338WYOR338W 1092 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 YBR071WYBR071W 636 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 YPR130CYPR130C 408 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 ECM31YBR176W 939 nt5.75□□□□□ -1.49
TY1A-ER1P0CX71 ASA1YPR085C 1332 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 NOP58YOR310C 1536 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 YCK1YHR135C 1617 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 YHR202WYHR202W 1809 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 GIM4YEL003W 336 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 YFL013W-AYFL013W-A 804 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 SER2YGR208W 930 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 IME1YJR094C 1083 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 TFS1YLR178C 660 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 CUE4YML101C 354 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 PFA3YNL326C 1011 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 YOL013W-BYOL013W-B 291 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 CYC2YOR037W 1101 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 CST26YBR042C 1194 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 GRE1YPL223C 507 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 YPT10YBR264C 600 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 APE4YHR113W 1473 nt5.74□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms