Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC026271.2-201ENST00000428091 497 ntBASIC29.2■■■□□ 2.26
SNRPA1P09661 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNRPA1P09661 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.2■■■□□ 2.26
SNRPA1P09661 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.2■■■□□ 2.26
SNRPA1P09661 AC009086.3-201ENST00000623486 1008 ntBASIC29.2■■■□□ 2.26
SNRPA1P09661 AC136469.2-201ENST00000623944 1028 ntBASIC29.2■■■□□ 2.26
SNRPA1P09661 RASA4CP-201ENST00000424092 1398 ntBASIC29.2■■■□□ 2.26
SNRPA1P09661 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNRPA1P09661 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
SNRPA1P09661 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SNRPA1P09661 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SNRPA1P09661 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.19■■■□□ 2.26
SNRPA1P09661 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.19■■■□□ 2.26
SNRPA1P09661 CA15P2-201ENST00000611168 834 ntBASIC29.19■■■□□ 2.26
SNRPA1P09661 AC135731.1-201ENST00000569415 2548 ntBASIC29.19■■■□□ 2.26
SNRPA1P09661 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SNRPA1P09661 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SNRPA1P09661 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SNRPA1P09661 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SNRPA1P09661 AC027682.1-201ENST00000562846 899 ntBASIC29.18■■■□□ 2.26
SNRPA1P09661 MIR3181-201ENST00000578512 73 ntBASIC29.18■■■□□ 2.26
SNRPA1P09661 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
SNRPA1P09661 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.17■■■□□ 2.26
SNRPA1P09661 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.17■■■□□ 2.26
SNRPA1P09661 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNRPA1P09661 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNRPA1P09661 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNRPA1P09661 AC008764.7-201ENST00000593779 1081 ntBASIC29.16■■■□□ 2.26
SNRPA1P09661 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.16■■■□□ 2.26
SNRPA1P09661 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNRPA1P09661 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SNRPA1P09661 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNRPA1P09661 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.15■■■□□ 2.26
SNRPA1P09661 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.15■■■□□ 2.26
SNRPA1P09661 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNRPA1P09661 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNRPA1P09661 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SNRPA1P09661 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNRPA1P09661 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.14■■■□□ 2.26
SNRPA1P09661 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNRPA1P09661 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.14■■■□□ 2.26
SNRPA1P09661 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SNRPA1P09661 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.14■■■□□ 2.26
SNRPA1P09661 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNRPA1P09661 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
SNRPA1P09661 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SNRPA1P09661 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNRPA1P09661 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.13■■■□□ 2.25
SNRPA1P09661 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNRPA1P09661 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.13■■■□□ 2.25
SNRPA1P09661 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
SNRPA1P09661 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNRPA1P09661 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SNRPA1P09661 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.12■■■□□ 2.25
SNRPA1P09661 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.12■■■□□ 2.25
SNRPA1P09661 AC099791.1-201ENST00000416440 715 ntBASIC29.12■■■□□ 2.25
SNRPA1P09661 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.12■■■□□ 2.25
SNRPA1P09661 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNRPA1P09661 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.12■■■□□ 2.25
SNRPA1P09661 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.11■■■□□ 2.25
SNRPA1P09661 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SNRPA1P09661 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNRPA1P09661 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.11■■■□□ 2.25
SNRPA1P09661 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.11■■■□□ 2.25
SNRPA1P09661 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.11■■■□□ 2.25
SNRPA1P09661 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SNRPA1P09661 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SNRPA1P09661 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNRPA1P09661 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 AC138932.3-201ENST00000567634 1902 ntBASIC29.1■■■□□ 2.25
SNRPA1P09661 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.1■■■□□ 2.25
SNRPA1P09661 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNRPA1P09661 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.1■■■□□ 2.25
SNRPA1P09661 AC142381.3-201ENST00000568208 1670 ntBASIC29.09■■■□□ 2.25
SNRPA1P09661 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNRPA1P09661 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.09■■■□□ 2.25
SNRPA1P09661 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNRPA1P09661 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
SNRPA1P09661 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
SNRPA1P09661 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNRPA1P09661 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNRPA1P09661 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNRPA1P09661 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNRPA1P09661 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.08■■■□□ 2.25
SNRPA1P09661 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNRPA1P09661 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SNRPA1P09661 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.08■■■□□ 2.25
SNRPA1P09661 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.08■■■□□ 2.25
SNRPA1P09661 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.08■■■□□ 2.25
SNRPA1P09661 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms