Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CTSBP07858 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSBP07858 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CTSBP07858 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 MIR638-201ENST00000385237 100 ntBASIC21.62■■□□□ 1.05
CTSBP07858 SRD5A1P1-201ENST00000442297 786 ntBASIC21.62■■□□□ 1.05
CTSBP07858 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.62■■□□□ 1.05
CTSBP07858 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTSBP07858 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSBP07858 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.62■■□□□ 1.05
CTSBP07858 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSBP07858 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.61■■□□□ 1.05
CTSBP07858 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSBP07858 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.61■■□□□ 1.05
CTSBP07858 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CTSBP07858 ABCB10P4-201ENST00000566803 2184 ntBASIC21.61■■□□□ 1.05
CTSBP07858 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSBP07858 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSBP07858 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSBP07858 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSBP07858 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSBP07858 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 UNC93B3-201ENST00000308076 687 ntBASIC21.6■■□□□ 1.05
CTSBP07858 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSBP07858 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSBP07858 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CTSBP07858 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.59■■□□□ 1.05
CTSBP07858 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CTSBP07858 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.59■■□□□ 1.05
CTSBP07858 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.59■■□□□ 1.05
CTSBP07858 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.59■■□□□ 1.05
CTSBP07858 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSBP07858 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSBP07858 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSBP07858 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSBP07858 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSBP07858 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.58■■□□□ 1.05
CTSBP07858 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.58■■□□□ 1.05
CTSBP07858 C17orf82-201ENST00000623772 1530 ntBASIC21.58■■□□□ 1.04
CTSBP07858 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.58■■□□□ 1.04
CTSBP07858 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CTSBP07858 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSBP07858 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSBP07858 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSBP07858 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTSBP07858 AC099791.2-201ENST00000605725 427 ntBASIC21.57■■□□□ 1.04
CTSBP07858 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CTSBP07858 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSBP07858 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSBP07858 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSBP07858 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTSBP07858 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSBP07858 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.55■■□□□ 1.04
CTSBP07858 AC006455.2-201ENST00000429931 906 ntBASIC21.55■■□□□ 1.04
CTSBP07858 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSBP07858 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSBP07858 AC141586.4-201ENST00000624558 1573 ntBASIC21.55■■□□□ 1.04
CTSBP07858 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CTSBP07858 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CTSBP07858 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CTSBP07858 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CTSBP07858 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSBP07858 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CTSBP07858 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSBP07858 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSBP07858 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSBP07858 AC019069.1-201ENST00000610008 1333 ntBASIC21.55■■□□□ 1.04
CTSBP07858 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSBP07858 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
CTSBP07858 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.54■■□□□ 1.04
CTSBP07858 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.54■■□□□ 1.04
CTSBP07858 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSBP07858 PBX2P1-201ENST00000493219 1291 ntBASIC21.54■■□□□ 1.04
CTSBP07858 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.54■■□□□ 1.04
CTSBP07858 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CTSBP07858 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSBP07858 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.53■■□□□ 1.04
CTSBP07858 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 AL136162.1-201ENST00000607711 1078 ntBASIC21.53■■□□□ 1.04
CTSBP07858 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.53■■□□□ 1.04
CTSBP07858 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSBP07858 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms