Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.19■□□□□ 0.98
HMGN2P05204 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
HMGN2P05204 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGN2P05204 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGN2P05204 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN2P05204 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN2P05204 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN2P05204 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGN2P05204 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN2P05204 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGN2P05204 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGN2P05204 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGN2P05204 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN2P05204 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN2P05204 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGN2P05204 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGN2P05204 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGN2P05204 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN2P05204 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGN2P05204 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN2P05204 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGN2P05204 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.17■□□□□ 0.98
HMGN2P05204 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGN2P05204 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.17■□□□□ 0.98
HMGN2P05204 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.17■□□□□ 0.98
HMGN2P05204 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 AC092068.2-201ENST00000590491 1708 ntBASIC21.17■□□□□ 0.98
HMGN2P05204 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGN2P05204 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HMGN2P05204 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGN2P05204 C9orf163-202ENST00000624034 2573 ntBASIC21.16■□□□□ 0.98
HMGN2P05204 AC133561.1-201ENST00000568600 2415 ntBASIC21.16■□□□□ 0.98
HMGN2P05204 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HMGN2P05204 RARRES2P1-201ENST00000474487 481 ntBASIC21.16■□□□□ 0.98
HMGN2P05204 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGN2P05204 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.16■□□□□ 0.98
HMGN2P05204 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGN2P05204 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGN2P05204 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.16■□□□□ 0.98
HMGN2P05204 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGN2P05204 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGN2P05204 AC021242.3-201ENST00000607598 1377 ntBASIC21.15■□□□□ 0.98
HMGN2P05204 BX664725.1-201ENST00000438252 379 ntBASIC21.15■□□□□ 0.98
HMGN2P05204 AC068473.5-201ENST00000616428 2072 ntBASIC21.15■□□□□ 0.98
HMGN2P05204 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
HMGN2P05204 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
HMGN2P05204 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
HMGN2P05204 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN2P05204 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.14■□□□□ 0.97
HMGN2P05204 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN2P05204 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN2P05204 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN2P05204 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HMGN2P05204 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGN2P05204 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HMGN2P05204 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HMGN2P05204 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.13■□□□□ 0.97
HMGN2P05204 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGN2P05204 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGN2P05204 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
HMGN2P05204 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
HMGN2P05204 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGN2P05204 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.12■□□□□ 0.97
HMGN2P05204 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGN2P05204 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGN2P05204 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HMGN2P05204 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGN2P05204 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN2P05204 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGN2P05204 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN2P05204 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN2P05204 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMGN2P05204 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HMGN2P05204 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HMGN2P05204 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN2P05204 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HMGN2P05204 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGN2P05204 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGN2P05204 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGN2P05204 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGN2P05204 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms