Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.13■□□□□ 0.97
PDGFAP04085 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDGFAP04085 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFAP04085 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFAP04085 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PDGFAP04085 AC010501.1-201ENST00000606270 1962 ntBASIC21.12■□□□□ 0.97
PDGFAP04085 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFAP04085 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.12■□□□□ 0.97
PDGFAP04085 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.12■□□□□ 0.97
PDGFAP04085 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDGFAP04085 AC008764.7-201ENST00000593779 1081 ntBASIC21.11■□□□□ 0.97
PDGFAP04085 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PDGFAP04085 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFAP04085 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFAP04085 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFAP04085 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFAP04085 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFAP04085 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFAP04085 AC027682.1-201ENST00000562846 899 ntBASIC21.1■□□□□ 0.97
PDGFAP04085 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFAP04085 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFAP04085 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFAP04085 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFAP04085 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PDGFAP04085 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFAP04085 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.09■□□□□ 0.97
PDGFAP04085 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDGFAP04085 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDGFAP04085 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFAP04085 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
PDGFAP04085 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFAP04085 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.09■□□□□ 0.97
PDGFAP04085 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFAP04085 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.08■□□□□ 0.97
PDGFAP04085 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFAP04085 AC099791.1-201ENST00000416440 715 ntBASIC21.08■□□□□ 0.97
PDGFAP04085 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.08■□□□□ 0.97
PDGFAP04085 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.08■□□□□ 0.97
PDGFAP04085 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PDGFAP04085 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.08■□□□□ 0.96
PDGFAP04085 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDGFAP04085 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDGFAP04085 AC009102.2-201ENST00000606772 1639 ntBASIC21.07■□□□□ 0.96
PDGFAP04085 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFAP04085 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.07■□□□□ 0.96
PDGFAP04085 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFAP04085 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFAP04085 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFAP04085 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.07■□□□□ 0.96
PDGFAP04085 AC011298.3-201ENST00000615796 283 ntBASIC21.07■□□□□ 0.96
PDGFAP04085 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFAP04085 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.07■□□□□ 0.96
PDGFAP04085 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.07■□□□□ 0.96
PDGFAP04085 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDGFAP04085 CLDN5-201ENST00000403084 2357 ntBASIC21.07■□□□□ 0.96
PDGFAP04085 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PDGFAP04085 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFAP04085 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFAP04085 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PDGFAP04085 AC091060.1-201ENST00000623524 1766 ntBASIC21.06■□□□□ 0.96
PDGFAP04085 IRS3P-201ENST00000223076 1006 ntBASIC21.06■□□□□ 0.96
PDGFAP04085 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFAP04085 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.06■□□□□ 0.96
PDGFAP04085 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PDGFAP04085 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.06■□□□□ 0.96
PDGFAP04085 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFAP04085 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDGFAP04085 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PDGFAP04085 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PDGFAP04085 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.05■□□□□ 0.96
PDGFAP04085 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDGFAP04085 AC012676.1-201ENST00000574705 1949 ntBASIC21.05■□□□□ 0.96
PDGFAP04085 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.05■□□□□ 0.96
PDGFAP04085 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFAP04085 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDGFAP04085 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFAP04085 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFAP04085 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFAP04085 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.04■□□□□ 0.96
PDGFAP04085 AL138724.1-201ENST00000606771 1088 ntBASIC21.04■□□□□ 0.96
PDGFAP04085 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDGFAP04085 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms