Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.74■■□□□ 1.07
MT-CO3P00414 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.74■■□□□ 1.07
MT-CO3P00414 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.74■■□□□ 1.07
MT-CO3P00414 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
MT-CO3P00414 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO3P00414 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO3P00414 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO3P00414 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO3P00414 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO3P00414 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO3P00414 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO3P00414 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MT-CO3P00414 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-CO3P00414 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.72■■□□□ 1.07
MT-CO3P00414 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-CO3P00414 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
MT-CO3P00414 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.72■■□□□ 1.07
MT-CO3P00414 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.72■■□□□ 1.07
MT-CO3P00414 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
MT-CO3P00414 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
MT-CO3P00414 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.72■■□□□ 1.07
MT-CO3P00414 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-CO3P00414 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-CO3P00414 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MT-CO3P00414 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-CO3P00414 SLC47A1P1-202ENST00000449666 945 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L2-201ENST00000561772 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L6-201ENST00000626483 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L1-201ENST00000627662 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L8-201ENST00000629013 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L3-201ENST00000630187 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L7-201ENST00000630678 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 DUX4L5-201ENST00000630834 1275 ntBASIC21.71■■□□□ 1.07
MT-CO3P00414 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.71■■□□□ 1.07
MT-CO3P00414 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MT-CO3P00414 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-CO3P00414 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.7■■□□□ 1.07
MT-CO3P00414 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
MT-CO3P00414 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.7■■□□□ 1.06
MT-CO3P00414 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MT-CO3P00414 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MT-CO3P00414 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 AL358852.1-201ENST00000623174 1268 ntBASIC21.7■■□□□ 1.06
MT-CO3P00414 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MT-CO3P00414 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-CO3P00414 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MT-CO3P00414 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
MT-CO3P00414 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
MT-CO3P00414 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.69■■□□□ 1.06
MT-CO3P00414 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.69■■□□□ 1.06
MT-CO3P00414 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.69■■□□□ 1.06
MT-CO3P00414 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.69■■□□□ 1.06
MT-CO3P00414 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.69■■□□□ 1.06
MT-CO3P00414 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.69■■□□□ 1.06
MT-CO3P00414 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MT-CO3P00414 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 AC092437.1-201ENST00000624794 1048 ntBASIC21.68■■□□□ 1.06
MT-CO3P00414 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 AL161729.1-201ENST00000604104 1402 ntBASIC21.68■■□□□ 1.06
MT-CO3P00414 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MT-CO3P00414 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.68■■□□□ 1.06
MT-CO3P00414 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-CO3P00414 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-CO3P00414 AC141586.4-201ENST00000624558 1573 ntBASIC21.67■■□□□ 1.06
MT-CO3P00414 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.67■■□□□ 1.06
MT-CO3P00414 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-CO3P00414 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
MT-CO3P00414 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-CO3P00414 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MT-CO3P00414 AC027612.3-201ENST00000413684 1047 ntBASIC21.67■■□□□ 1.06
MT-CO3P00414 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-CO3P00414 AC123595.1-201ENST00000440769 1046 ntBASIC21.67■■□□□ 1.06
MT-CO3P00414 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-CO3P00414 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO3P00414 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO3P00414 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.66■■□□□ 1.06
MT-CO3P00414 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MT-CO3P00414 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO3P00414 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MT-CO3P00414 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.66■■□□□ 1.06
MT-CO3P00414 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.66■■□□□ 1.06
MT-CO3P00414 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MT-CO3P00414 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO3P00414 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.65■■□□□ 1.06
MT-CO3P00414 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms