Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRUB2O95900 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRUB2O95900 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRUB2O95900 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRUB2O95900 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRUB2O95900 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TRUB2O95900 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRUB2O95900 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRUB2O95900 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.82■■□□□ 1.4
TRUB2O95900 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.82■■□□□ 1.4
TRUB2O95900 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 MIR6724-1-201ENST00000616420 92 ntBASIC23.82■■□□□ 1.4
TRUB2O95900 MIR6724-2-201ENST00000616483 92 ntBASIC23.82■■□□□ 1.4
TRUB2O95900 MIR6724-4-201ENST00000617390 92 ntBASIC23.82■■□□□ 1.4
TRUB2O95900 MIR6724-3-201ENST00000622482 92 ntBASIC23.82■■□□□ 1.4
TRUB2O95900 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRUB2O95900 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRUB2O95900 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRUB2O95900 ALDH1A3-203ENST00000557963 1670 ntBASIC23.81■■□□□ 1.4
TRUB2O95900 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.81■■□□□ 1.4
TRUB2O95900 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
TRUB2O95900 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRUB2O95900 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRUB2O95900 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.81■■□□□ 1.4
TRUB2O95900 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.81■■□□□ 1.4
TRUB2O95900 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.8■■□□□ 1.4
TRUB2O95900 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.8■■□□□ 1.4
TRUB2O95900 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.8■■□□□ 1.4
TRUB2O95900 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.8■■□□□ 1.4
TRUB2O95900 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRUB2O95900 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.79■■□□□ 1.4
TRUB2O95900 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRUB2O95900 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRUB2O95900 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TRUB2O95900 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRUB2O95900 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRUB2O95900 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TRUB2O95900 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
TRUB2O95900 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.78■■□□□ 1.4
TRUB2O95900 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRUB2O95900 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRUB2O95900 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.78■■□□□ 1.4
TRUB2O95900 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRUB2O95900 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRUB2O95900 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.77■■□□□ 1.4
TRUB2O95900 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRUB2O95900 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRUB2O95900 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.77■■□□□ 1.4
TRUB2O95900 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.77■■□□□ 1.4
TRUB2O95900 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRUB2O95900 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRUB2O95900 AC005703.6-201ENST00000623265 1329 ntBASIC23.77■■□□□ 1.4
TRUB2O95900 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRUB2O95900 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRUB2O95900 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRUB2O95900 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.76■■□□□ 1.39
TRUB2O95900 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRUB2O95900 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
TRUB2O95900 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRUB2O95900 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.76■■□□□ 1.39
TRUB2O95900 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.76■■□□□ 1.39
TRUB2O95900 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRUB2O95900 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.75■■□□□ 1.39
TRUB2O95900 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.75■■□□□ 1.39
TRUB2O95900 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRUB2O95900 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRUB2O95900 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRUB2O95900 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.75■■□□□ 1.39
TRUB2O95900 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRUB2O95900 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.75■■□□□ 1.39
TRUB2O95900 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRUB2O95900 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRUB2O95900 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.74■■□□□ 1.39
TRUB2O95900 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRUB2O95900 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRUB2O95900 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.74■■□□□ 1.39
TRUB2O95900 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.74■■□□□ 1.39
TRUB2O95900 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRUB2O95900 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRUB2O95900 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRUB2O95900 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRUB2O95900 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRUB2O95900 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.73■■□□□ 1.39
TRUB2O95900 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.73■■□□□ 1.39
TRUB2O95900 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 512.6 ms