Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT1O95170 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT1O95170 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT1O95170 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT1O95170 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT1O95170 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDRT1O95170 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CDRT1O95170 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDRT1O95170 FOXO3B-201ENST00000395675 1928 ntBASIC20.18■□□□□ 0.82
CDRT1O95170 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.18■□□□□ 0.82
CDRT1O95170 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT1O95170 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CDRT1O95170 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDRT1O95170 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.17■□□□□ 0.82
CDRT1O95170 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDRT1O95170 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDRT1O95170 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.17■□□□□ 0.82
CDRT1O95170 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDRT1O95170 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDRT1O95170 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDRT1O95170 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDRT1O95170 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDRT1O95170 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CDRT1O95170 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDRT1O95170 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDRT1O95170 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDRT1O95170 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDRT1O95170 MIR639-201ENST00000384974 98 ntBASIC20.16■□□□□ 0.82
CDRT1O95170 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.16■□□□□ 0.82
CDRT1O95170 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.16■□□□□ 0.82
CDRT1O95170 AC022413.1-201ENST00000624602 984 ntBASIC20.16■□□□□ 0.82
CDRT1O95170 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.16■□□□□ 0.82
CDRT1O95170 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CDRT1O95170 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDRT1O95170 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDRT1O95170 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDRT1O95170 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDRT1O95170 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDRT1O95170 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDRT1O95170 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDRT1O95170 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDRT1O95170 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDRT1O95170 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDRT1O95170 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
CDRT1O95170 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDRT1O95170 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDRT1O95170 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDRT1O95170 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDRT1O95170 ECEL1P2-201ENST00000461596 1295 ntBASIC20.14■□□□□ 0.81
CDRT1O95170 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDRT1O95170 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDRT1O95170 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 RP9P-202ENST00000450133 1212 ntBASIC20.13■□□□□ 0.81
CDRT1O95170 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.13■□□□□ 0.81
CDRT1O95170 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.13■□□□□ 0.81
CDRT1O95170 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDRT1O95170 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDRT1O95170 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
CDRT1O95170 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 AL137060.1-201ENST00000618151 2648 ntBASIC20.12■□□□□ 0.81
CDRT1O95170 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CDRT1O95170 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDRT1O95170 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.12■□□□□ 0.81
CDRT1O95170 AC093536.1-201ENST00000569153 554 ntBASIC20.12■□□□□ 0.81
CDRT1O95170 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.12■□□□□ 0.81
CDRT1O95170 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.12■□□□□ 0.81
CDRT1O95170 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.12■□□□□ 0.81
CDRT1O95170 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
CDRT1O95170 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDRT1O95170 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDRT1O95170 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.11■□□□□ 0.81
CDRT1O95170 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDRT1O95170 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDRT1O95170 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.11■□□□□ 0.81
CDRT1O95170 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.11■□□□□ 0.81
CDRT1O95170 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDRT1O95170 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDRT1O95170 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.11■□□□□ 0.81
CDRT1O95170 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDRT1O95170 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDRT1O95170 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDRT1O95170 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.1■□□□□ 0.81
CDRT1O95170 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.1■□□□□ 0.81
CDRT1O95170 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms