Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF4O60810 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF4O60810 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF4O60810 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF4O60810 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF4O60810 AC009299.2-201ENST00000482477 511 ntBASIC21.9■■□□□ 1.1
PRAMEF4O60810 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.9■■□□□ 1.1
PRAMEF4O60810 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PRAMEF4O60810 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.9■■□□□ 1.1
PRAMEF4O60810 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF4O60810 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF4O60810 C9orf163-202ENST00000624034 2573 ntBASIC21.9■■□□□ 1.1
PRAMEF4O60810 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
PRAMEF4O60810 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.89■■□□□ 1.1
PRAMEF4O60810 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PRAMEF4O60810 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 BX664725.1-201ENST00000438252 379 ntBASIC21.89■■□□□ 1.09
PRAMEF4O60810 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.89■■□□□ 1.09
PRAMEF4O60810 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.89■■□□□ 1.09
PRAMEF4O60810 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.89■■□□□ 1.09
PRAMEF4O60810 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF4O60810 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF4O60810 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF4O60810 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF4O60810 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
PRAMEF4O60810 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF4O60810 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF4O60810 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF4O60810 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF4O60810 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF4O60810 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.86■■□□□ 1.09
PRAMEF4O60810 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF4O60810 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PRAMEF4O60810 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEF4O60810 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF4O60810 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF4O60810 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEF4O60810 AC092068.2-201ENST00000590491 1708 ntBASIC21.86■■□□□ 1.09
PRAMEF4O60810 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF4O60810 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF4O60810 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PRAMEF4O60810 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 Z92544.1-202ENST00000571933 1220 ntBASIC21.85■■□□□ 1.09
PRAMEF4O60810 AC092028.1-203ENST00000608262 953 ntBASIC21.85■■□□□ 1.09
PRAMEF4O60810 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEF4O60810 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
PRAMEF4O60810 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF4O60810 AC133561.1-201ENST00000568600 2415 ntBASIC21.84■■□□□ 1.09
PRAMEF4O60810 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
PRAMEF4O60810 AC239859.2-201ENST00000444165 318 ntBASIC21.84■■□□□ 1.09
PRAMEF4O60810 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.84■■□□□ 1.09
PRAMEF4O60810 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEF4O60810 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
PRAMEF4O60810 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEF4O60810 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF4O60810 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEF4O60810 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEF4O60810 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.83■■□□□ 1.09
PRAMEF4O60810 MIR6722-201ENST00000617286 78 ntBASIC21.83■■□□□ 1.09
PRAMEF4O60810 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF4O60810 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.83■■□□□ 1.08
PRAMEF4O60810 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.83■■□□□ 1.08
PRAMEF4O60810 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.83■■□□□ 1.08
PRAMEF4O60810 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF4O60810 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEF4O60810 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.08
PRAMEF4O60810 AC068473.5-201ENST00000616428 2072 ntBASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms