Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.35■■□□□ 1.17
GDF9O60383 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
GDF9O60383 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.35■■□□□ 1.17
GDF9O60383 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.35■■□□□ 1.17
GDF9O60383 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.35■■□□□ 1.17
GDF9O60383 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.35■■□□□ 1.17
GDF9O60383 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.35■■□□□ 1.17
GDF9O60383 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
GDF9O60383 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GDF9O60383 AC097639.1-201ENST00000565519 1891 ntBASIC22.34■■□□□ 1.17
GDF9O60383 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GDF9O60383 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.34■■□□□ 1.17
GDF9O60383 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.34■■□□□ 1.17
GDF9O60383 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.34■■□□□ 1.17
GDF9O60383 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
GDF9O60383 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GDF9O60383 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GDF9O60383 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF9O60383 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GDF9O60383 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
GDF9O60383 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.17
GDF9O60383 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.33■■□□□ 1.17
GDF9O60383 MIR572-201ENST00000384983 95 ntBASIC22.33■■□□□ 1.17
GDF9O60383 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.33■■□□□ 1.17
GDF9O60383 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.33■■□□□ 1.17
GDF9O60383 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.33■■□□□ 1.17
GDF9O60383 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.33■■□□□ 1.17
GDF9O60383 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.33■■□□□ 1.17
GDF9O60383 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
GDF9O60383 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.33■■□□□ 1.16
GDF9O60383 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
GDF9O60383 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GDF9O60383 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
GDF9O60383 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.32■■□□□ 1.16
GDF9O60383 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.32■■□□□ 1.16
GDF9O60383 TERF1P2-201ENST00000583350 1212 ntBASIC22.32■■□□□ 1.16
GDF9O60383 pRNA.6-201ENST00000610482 90 ntBASIC22.32■■□□□ 1.16
GDF9O60383 pRNA.5-201ENST00000612139 90 ntBASIC22.32■■□□□ 1.16
GDF9O60383 pRNA.11-201ENST00000618423 90 ntBASIC22.32■■□□□ 1.16
GDF9O60383 pRNA.13-201ENST00000619112 90 ntBASIC22.32■■□□□ 1.16
GDF9O60383 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.32■■□□□ 1.16
GDF9O60383 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.32■■□□□ 1.16
GDF9O60383 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
GDF9O60383 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.31■■□□□ 1.16
GDF9O60383 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
GDF9O60383 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.31■■□□□ 1.16
GDF9O60383 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.31■■□□□ 1.16
GDF9O60383 AL354811.1-201ENST00000610286 706 ntBASIC22.31■■□□□ 1.16
GDF9O60383 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GDF9O60383 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
GDF9O60383 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.31■■□□□ 1.16
GDF9O60383 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
GDF9O60383 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.3■■□□□ 1.16
GDF9O60383 RAP2CP1-201ENST00000605103 478 ntBASIC22.3■■□□□ 1.16
GDF9O60383 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
GDF9O60383 TMEM191A-211ENST00000637163 1067 ntBASIC22.3■■□□□ 1.16
GDF9O60383 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF9O60383 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF9O60383 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GDF9O60383 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF9O60383 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
GDF9O60383 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.29■■□□□ 1.16
GDF9O60383 IGHV3-19-201ENST00000521488 291 ntBASIC22.29■■□□□ 1.16
GDF9O60383 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GDF9O60383 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.29■■□□□ 1.16
GDF9O60383 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
GDF9O60383 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
GDF9O60383 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
GDF9O60383 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
GDF9O60383 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.28■■□□□ 1.16
GDF9O60383 CDCA4P2-201ENST00000441182 718 ntBASIC22.28■■□□□ 1.16
GDF9O60383 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.28■■□□□ 1.16
GDF9O60383 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GDF9O60383 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.28■■□□□ 1.16
GDF9O60383 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.28■■□□□ 1.16
GDF9O60383 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
GDF9O60383 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
GDF9O60383 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDF9O60383 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDF9O60383 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GDF9O60383 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.27■■□□□ 1.16
GDF9O60383 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
GDF9O60383 AC104771.1-201ENST00000603335 964 ntBASIC22.27■■□□□ 1.16
GDF9O60383 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.27■■□□□ 1.16
GDF9O60383 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
GDF9O60383 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
GDF9O60383 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GDF9O60383 LINC02228-203ENST00000641970 1355 ntBASIC22.26■■□□□ 1.15
GDF9O60383 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.26■■□□□ 1.15
GDF9O60383 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms