Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXN1O15353 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.18■■□□□ 1.94
FOXN1O15353 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.18■■□□□ 1.94
FOXN1O15353 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXN1O15353 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FOXN1O15353 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FOXN1O15353 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.17■■□□□ 1.94
FOXN1O15353 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.17■■□□□ 1.94
FOXN1O15353 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.17■■□□□ 1.94
FOXN1O15353 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FOXN1O15353 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FOXN1O15353 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FOXN1O15353 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.16■■□□□ 1.94
FOXN1O15353 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.16■■□□□ 1.94
FOXN1O15353 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.16■■□□□ 1.94
FOXN1O15353 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.15■■□□□ 1.94
FOXN1O15353 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
FOXN1O15353 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.15■■□□□ 1.94
FOXN1O15353 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
FOXN1O15353 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
FOXN1O15353 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.14■■□□□ 1.94
FOXN1O15353 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
FOXN1O15353 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
FOXN1O15353 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
FOXN1O15353 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.14■■□□□ 1.94
FOXN1O15353 NTF6G-201ENST00000591094 616 ntBASIC27.14■■□□□ 1.94
FOXN1O15353 AC104771.1-201ENST00000603335 964 ntBASIC27.14■■□□□ 1.94
FOXN1O15353 AL138724.1-201ENST00000606771 1088 ntBASIC27.14■■□□□ 1.94
FOXN1O15353 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FOXN1O15353 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
FOXN1O15353 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
FOXN1O15353 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
FOXN1O15353 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
FOXN1O15353 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.13■■□□□ 1.93
FOXN1O15353 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.13■■□□□ 1.93
FOXN1O15353 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
FOXN1O15353 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
FOXN1O15353 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FOXN1O15353 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FOXN1O15353 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
FOXN1O15353 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
FOXN1O15353 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
FOXN1O15353 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
FOXN1O15353 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXN1O15353 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXN1O15353 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXN1O15353 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
FOXN1O15353 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.11■■□□□ 1.93
FOXN1O15353 AC099791.2-201ENST00000605725 427 ntBASIC27.11■■□□□ 1.93
FOXN1O15353 AC233992.3-201ENST00000607491 485 ntBASIC27.11■■□□□ 1.93
FOXN1O15353 AC080038.1-201ENST00000611274 1154 ntBASIC27.11■■□□□ 1.93
FOXN1O15353 AC245100.8-202ENST00000629247 1058 ntBASIC27.11■■□□□ 1.93
FOXN1O15353 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
FOXN1O15353 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXN1O15353 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.1■■□□□ 1.93
FOXN1O15353 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.1■■□□□ 1.93
FOXN1O15353 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FOXN1O15353 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
FOXN1O15353 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.1■■□□□ 1.93
FOXN1O15353 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.1■■□□□ 1.93
FOXN1O15353 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.1■■□□□ 1.93
FOXN1O15353 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.1■■□□□ 1.93
FOXN1O15353 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
FOXN1O15353 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.09■■□□□ 1.93
FOXN1O15353 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
FOXN1O15353 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.09■■□□□ 1.93
FOXN1O15353 AC123595.1-201ENST00000440769 1046 ntBASIC27.09■■□□□ 1.93
FOXN1O15353 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.09■■□□□ 1.93
FOXN1O15353 RAP2CP1-201ENST00000605103 478 ntBASIC27.09■■□□□ 1.93
FOXN1O15353 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.09■■□□□ 1.93
FOXN1O15353 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
FOXN1O15353 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.08■■□□□ 1.93
FOXN1O15353 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.08■■□□□ 1.93
FOXN1O15353 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
FOXN1O15353 AL355802.2-201ENST00000402069 882 ntBASIC27.08■■□□□ 1.93
FOXN1O15353 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
FOXN1O15353 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.08■■□□□ 1.93
FOXN1O15353 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.08■■□□□ 1.93
FOXN1O15353 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
FOXN1O15353 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXN1O15353 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
FOXN1O15353 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
FOXN1O15353 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXN1O15353 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.07■■□□□ 1.92
FOXN1O15353 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXN1O15353 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXN1O15353 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
FOXN1O15353 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
FOXN1O15353 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
FOXN1O15353 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
FOXN1O15353 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
FOXN1O15353 TSPY20P-201ENST00000450910 630 ntBASIC27.05■■□□□ 1.92
FOXN1O15353 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.05■■□□□ 1.92
FOXN1O15353 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms