Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF11O14788 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.39■□□□□ 0.85
TNFSF11O14788 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF11O14788 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF11O14788 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TNFSF11O14788 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF11O14788 AC131281.2-201ENST00000520478 145 ntBASIC20.38■□□□□ 0.85
TNFSF11O14788 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFSF11O14788 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF11O14788 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF11O14788 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF11O14788 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TNFSF11O14788 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF11O14788 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF11O14788 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF11O14788 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF11O14788 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF11O14788 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF11O14788 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF11O14788 AC008406.3-201ENST00000620001 1374 ntBASIC20.36■□□□□ 0.85
TNFSF11O14788 AC093323.1-202ENST00000635031 2045 ntBASIC20.36■□□□□ 0.85
TNFSF11O14788 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TNFSF11O14788 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TNFSF11O14788 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF11O14788 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFSF11O14788 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.36■□□□□ 0.85
TNFSF11O14788 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF11O14788 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF11O14788 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF11O14788 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFSF11O14788 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF11O14788 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TNFSF11O14788 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TNFSF11O14788 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TNFSF11O14788 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF11O14788 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.34■□□□□ 0.85
TNFSF11O14788 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF11O14788 AL512631.2-201ENST00000604634 923 ntBASIC20.34■□□□□ 0.85
TNFSF11O14788 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF11O14788 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF11O14788 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF11O14788 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF11O14788 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF11O14788 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF11O14788 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF11O14788 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFSF11O14788 MIR4466-201ENST00000606121 54 ntBASIC20.33■□□□□ 0.85
TNFSF11O14788 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF11O14788 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF11O14788 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF11O14788 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.33■□□□□ 0.84
TNFSF11O14788 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TNFSF11O14788 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TNFSF11O14788 AC009102.2-201ENST00000606772 1639 ntBASIC20.32■□□□□ 0.84
TNFSF11O14788 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF11O14788 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFSF11O14788 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF11O14788 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF11O14788 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF11O14788 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF11O14788 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF11O14788 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF11O14788 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TNFSF11O14788 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF11O14788 AL136116.3-201ENST00000402907 1138 ntBASIC20.31■□□□□ 0.84
TNFSF11O14788 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF11O14788 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF11O14788 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF11O14788 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TNFSF11O14788 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.3■□□□□ 0.84
TNFSF11O14788 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFSF11O14788 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms