Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB4C9JG80 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPB4C9JG80 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB4C9JG80 AC068473.5-201ENST00000616428 2072 ntBASIC20.14■□□□□ 0.81
NPIPB4C9JG80 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB4C9JG80 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
NPIPB4C9JG80 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 RARRES2P1-201ENST00000474487 481 ntBASIC20.11■□□□□ 0.81
NPIPB4C9JG80 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 KRT125P-201ENST00000546827 989 ntBASIC20.11■□□□□ 0.81
NPIPB4C9JG80 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.11■□□□□ 0.81
NPIPB4C9JG80 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 AC005703.6-201ENST00000623265 1329 ntBASIC20.1■□□□□ 0.81
NPIPB4C9JG80 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 AC092028.1-203ENST00000608262 953 ntBASIC20.1■□□□□ 0.81
NPIPB4C9JG80 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms