Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3FA6NER0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3FA6NER0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3FA6NER0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 AL138724.1-201ENST00000606771 1088 ntBASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TBC1D3FA6NER0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3FA6NER0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TBC1D3FA6NER0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TBC1D3FA6NER0 MIR939-201ENST00000401314 82 ntBASIC22.64■■□□□ 1.21
TBC1D3FA6NER0 AP001330.3-201ENST00000520123 633 ntBASIC22.64■■□□□ 1.21
TBC1D3FA6NER0 AC011298.3-201ENST00000615796 283 ntBASIC22.64■■□□□ 1.21
TBC1D3FA6NER0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3FA6NER0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3FA6NER0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 AC105265.2-201ENST00000467189 838 ntBASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 AC009086.3-201ENST00000623486 1008 ntBASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3FA6NER0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 AC006455.2-201ENST00000429931 906 ntBASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3FA6NER0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 AC138932.3-201ENST00000567634 1902 ntBASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 AC091305.1-201ENST00000479476 895 ntBASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 AC142381.3-201ENST00000568208 1670 ntBASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.61■■□□□ 1.21
TBC1D3FA6NER0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 AC008764.7-201ENST00000593779 1081 ntBASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TBC1D3FA6NER0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TBC1D3FA6NER0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms