Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.08■■□□□ 1.6
TRIM43BA6NCK2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM43BA6NCK2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.06■■□□□ 1.6
TRIM43BA6NCK2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TRIM43BA6NCK2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 MIR572-201ENST00000384983 95 ntBASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 AC012414.1-201ENST00000556676 535 ntBASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM43BA6NCK2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM43BA6NCK2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIM43BA6NCK2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM43BA6NCK2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
TRIM43BA6NCK2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM43BA6NCK2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 AC010501.1-201ENST00000606270 1962 ntBASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 AL022069.1-201ENST00000568025 1636 ntBASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM43BA6NCK2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 IGHV3-19-201ENST00000521488 291 ntBASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 KRT18P14-201ENST00000534205 1250 ntBASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM43BA6NCK2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25■■□□□ 1.59
TRIM43BA6NCK2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25■■□□□ 1.59
TRIM43BA6NCK2 AL354811.1-201ENST00000610286 706 ntBASIC25■■□□□ 1.59
TRIM43BA6NCK2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM43BA6NCK2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25■■□□□ 1.59
TRIM43BA6NCK2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM43BA6NCK2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 TERF1P2-201ENST00000583350 1212 ntBASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM43BA6NCK2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM43BA6NCK2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM43BA6NCK2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM43BA6NCK2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM43BA6NCK2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
TRIM43BA6NCK2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM43BA6NCK2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms