Protein–RNA interactions for Protein: A2RRP1

NBAS, Neuroblastoma-amplified sequence, humanhuman

Predictions only

Length 2,371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBASA2RRP1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.44■□□□□ 0.86
NBASA2RRP1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.43■□□□□ 0.86
NBASA2RRP1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NBASA2RRP1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.43■□□□□ 0.86
NBASA2RRP1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NBASA2RRP1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.43■□□□□ 0.86
NBASA2RRP1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NBASA2RRP1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NBASA2RRP1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.42■□□□□ 0.86
NBASA2RRP1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.42■□□□□ 0.86
NBASA2RRP1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 KRT18P61-201ENST00000585825 1298 ntBASIC20.42■□□□□ 0.86
NBASA2RRP1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 AC026185.1-201ENST00000445748 174 ntBASIC20.42■□□□□ 0.86
NBASA2RRP1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NBASA2RRP1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NBASA2RRP1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
NBASA2RRP1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NBASA2RRP1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NBASA2RRP1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NBASA2RRP1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NBASA2RRP1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.41■□□□□ 0.86
NBASA2RRP1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NBASA2RRP1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.41■□□□□ 0.86
NBASA2RRP1 AC104771.1-201ENST00000603335 964 ntBASIC20.41■□□□□ 0.86
NBASA2RRP1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NBASA2RRP1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NBASA2RRP1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.4■□□□□ 0.86
NBASA2RRP1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NBASA2RRP1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NBASA2RRP1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.4■□□□□ 0.86
NBASA2RRP1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.4■□□□□ 0.86
NBASA2RRP1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.4■□□□□ 0.86
NBASA2RRP1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.4■□□□□ 0.86
NBASA2RRP1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NBASA2RRP1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NBASA2RRP1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.4■□□□□ 0.86
NBASA2RRP1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.4■□□□□ 0.86
NBASA2RRP1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NBASA2RRP1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.4■□□□□ 0.86
NBASA2RRP1 AC091060.1-201ENST00000623524 1766 ntBASIC20.4■□□□□ 0.86
NBASA2RRP1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
NBASA2RRP1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NBASA2RRP1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NBASA2RRP1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.39■□□□□ 0.86
NBASA2RRP1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
NBASA2RRP1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NBASA2RRP1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NBASA2RRP1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.39■□□□□ 0.85
NBASA2RRP1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NBASA2RRP1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NBASA2RRP1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.39■□□□□ 0.85
NBASA2RRP1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
NBASA2RRP1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NBASA2RRP1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NBASA2RRP1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.39■□□□□ 0.85
NBASA2RRP1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.39■□□□□ 0.85
NBASA2RRP1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NBASA2RRP1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NBASA2RRP1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NBASA2RRP1 IGHV3-19-201ENST00000521488 291 ntBASIC20.38■□□□□ 0.85
NBASA2RRP1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.38■□□□□ 0.85
NBASA2RRP1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 AC080038.1-201ENST00000611274 1154 ntBASIC20.38■□□□□ 0.85
NBASA2RRP1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NBASA2RRP1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.37■□□□□ 0.85
NBASA2RRP1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.37■□□□□ 0.85
NBASA2RRP1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NBASA2RRP1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NBASA2RRP1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBASA2RRP1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBASA2RRP1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBASA2RRP1 AC006015.1-201ENST00000429970 570 ntBASIC20.36■□□□□ 0.85
NBASA2RRP1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NBASA2RRP1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.36■□□□□ 0.85
NBASA2RRP1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NBASA2RRP1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NBASA2RRP1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms