Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.33■■□□□ 1.01
TCRBV3S1A0A5B6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
TCRBV3S1A0A5B6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.33■■□□□ 1
TCRBV3S1A0A5B6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 AL137060.1-201ENST00000618151 2648 ntBASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TCRBV3S1A0A5B6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCRBV3S1A0A5B6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCRBV3S1A0A5B6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 AC090877.2-201ENST00000558441 1738 ntBASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV3S1A0A5B6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
TCRBV3S1A0A5B6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.28■■□□□ 1
TCRBV3S1A0A5B6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV3S1A0A5B6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.28■■□□□ 1
TCRBV3S1A0A5B6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TCRBV3S1A0A5B6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 MIR3648-2-201ENST00000581792 180 ntBASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 MIR3648-1-201ENST00000615959 180 ntBASIC21.27■■□□□ 1
TCRBV3S1A0A5B6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TCRBV3S1A0A5B6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.27■□□□□ 0.99
TCRBV3S1A0A5B6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 ECEL1P2-201ENST00000461596 1295 ntBASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV3S1A0A5B6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV3S1A0A5B6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 RAP2CP1-202ENST00000605179 643 ntBASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 AC139530.1-201ENST00000575312 1977 ntBASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms