Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 EP400NL-214ENST00000641289 2402 ntBASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
TCRBV9S1A1TA0A576 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 AC019171.1-201ENST00000601251 1056 ntBASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TCRBV9S1A1TA0A576 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TCRBV9S1A1TA0A576 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TCRBV9S1A1TA0A576 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 AC022616.5-201ENST00000518796 181 ntBASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.83■■□□□ 1.25
TCRBV9S1A1TA0A576 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.24
TCRBV9S1A1TA0A576 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TCRBV9S1A1TA0A576 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.83■■□□□ 1.24
TCRBV9S1A1TA0A576 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TCRBV9S1A1TA0A576 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.81■■□□□ 1.24
TCRBV9S1A1TA0A576 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TCRBV9S1A1TA0A576 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TCRBV9S1A1TA0A576 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 AC139795.1-202ENST00000500444 432 ntBASIC22.78■■□□□ 1.24
TCRBV9S1A1TA0A576 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms