Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 AL117332.1-201ENST00000622628 974 ntBASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV41A0A0B4J266 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV41A0A0B4J266 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRAV41A0A0B4J266 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV41A0A0B4J266 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV41A0A0B4J266 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 MIR3621-201ENST00000580529 85 ntBASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRAV41A0A0B4J266 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV41A0A0B4J266 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV41A0A0B4J266 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV41A0A0B4J266 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV41A0A0B4J266 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms