Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 KHSRPP1-201ENST00000427983 1768 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC087203.1-201ENST00000532111 1181 ntBASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC091304.3-201ENST00000566500 716 ntBASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC006116.2-201ENST00000589958 988 ntBASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 AC005274.1-201ENST00000623460 802 ntBASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTCH2Q9Y6C5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 RN7SL128P-201ENST00000467883 305 ntBASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PRSS3P1-201ENST00000503996 742 ntBASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 CICP6-201ENST00000457191 2729 ntBASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AL162727.3-201ENST00000635661 2787 ntBASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCH2Q9Y6C5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms