Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 KRT8P4-201ENST00000509735 1454 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 CICP12-201ENST00000455801 843 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RN7SL713P-201ENST00000582127 302 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 AC068587.10-201ENST00000641210 219 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 AC105206.1-202ENST00000314927 2368 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 FAM90A12P-201ENST00000519497 2375 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 FAM90A24P-201ENST00000520792 2369 ntBASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF3BQ9BZI7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 AL022313.4-201ENST00000562756 2046 ntBASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 CD8B2-202ENST00000417670 633 ntBASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.37■□□□□ 0.37
UPF3BQ9BZI7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms