Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 INGX-202ENST00000489074 768 ntBASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AC009118.2-201ENST00000613275 655 ntBASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 AC020658.7-201ENST00000624274 2442 ntBASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 RFPL4AP1-201ENST00000530883 850 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 ENPP7P5-201ENST00000541031 1031 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 WASH4P-201ENST00000564273 1246 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC008494.3-201ENST00000606615 944 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 WFDC1-204ENST00000613603 549 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 AC145423.3-201ENST00000615987 467 ntBASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HDHD3Q9BSH5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms