Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 CNN2P10-201ENST00000443067 918 ntBASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 HOMER2P2-201ENST00000451621 847 ntBASIC15.39■□□□□ 0.05
TRIM11Q96F44 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AL022313.4-201ENST00000562756 2046 ntBASIC15.38■□□□□ 0.05
TRIM11Q96F44 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 RPL7P3-201ENST00000441388 714 ntBASIC15.38■□□□□ 0.05
TRIM11Q96F44 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AC023310.1-201ENST00000554836 735 ntBASIC15.38■□□□□ 0.05
TRIM11Q96F44 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AC132192.2-201ENST00000596206 1147 ntBASIC15.38■□□□□ 0.05
TRIM11Q96F44 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM11Q96F44 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM11Q96F44 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms