Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AP001331.1-201ENST00000413008 1015 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 C21orf62-203ENST00000487113 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC109635.1-201ENST00000529200 490 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC099795.2-201ENST00000639582 440 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RBP4-203ENST00000371469 814 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AL365366.1-201ENST00000414898 853 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ALOX12P2-203ENST00000570921 1945 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AL139390.1-201ENST00000423568 517 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 HNRNPA1P9-201ENST00000450624 950 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 IGHVII-74-1-201ENST00000517572 241 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC145207.7-201ENST00000580125 958 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ILK-216ENST00000627400 111 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SNORA30.1-201ENST00000363193 129 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AL121994.1-201ENST00000413189 402 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 MSMP-202ENST00000436428 670 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RN7SL40P-201ENST00000474689 342 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC093367.1-201ENST00000517332 420 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 OR4A49P-201ENST00000527050 632 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 PDXDC2P-206ENST00000534700 1315 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 GULOP-201ENST00000454030 748 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC126177.1-202ENST00000548419 973 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ERH-202ENST00000555373 586 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms