Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKAP2Q8WWK9 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AL022323.5-201ENST00000624101 2059 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC087499.5-201ENST00000452760 1342 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 VENTXP1-201ENST00000569334 2716 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AL161932.2-201ENST00000435436 679 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC114812.1-204ENST00000449669 728 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC023141.5-201ENST00000458585 616 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 MIR4469-201ENST00000583919 79 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC134684.3-201ENST00000641758 218 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 AC115284.2-201ENST00000624646 2054 ntBASIC14.46□□□□□ -0.09
CKAP2Q8WWK9 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CKAP2Q8WWK9 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 SPDYE22P-201ENST00000582158 798 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms