Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 AL353779.1-201ENST00000434793 351 ntBASIC12.66□□□□□ -0.38
CCDC107Q8WV48 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 AC026410.3-201ENST00000514280 936 ntBASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CCDC107Q8WV48 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC093525.8-201ENST00000624099 1342 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 Z82170.1-201ENST00000625081 3192 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC068760.1-201ENST00000493579 1953 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms