Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AC063926.3-201ENST00000624734 5658 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 TSPY25P-201ENST00000429463 745 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 OR2R1P-201ENST00000441404 914 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AC003686.1-201ENST00000550956 1034 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 MIR3188-201ENST00000583494 85 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 LINC01783-202ENST00000614408 828 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 BX284668.2-205ENST00000619677 828 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AL805961.1-201ENST00000642026 753 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 AC009093.10-201ENST00000641956 1442 ntBASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHKBP1Q8TBC3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 RN7SL181P-201ENST00000462921 277 ntBASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PHBP15-201ENST00000574228 665 ntBASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AC027601.5-201ENST00000624065 2482 ntBASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms