Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 RPSAP36-202ENST00000494591 1261 ntBASIC12.76□□□□□ -0.37
CPEB3Q8NE35 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 RN7SL560P-201ENST00000577943 264 ntBASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC244394.1-201ENST00000435000 1665 ntBASIC12.76□□□□□ -0.37
CPEB3Q8NE35 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AC152010.1-201ENST00000415779 2006 ntBASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.76□□□□□ -0.37
CPEB3Q8NE35 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AC118758.2-201ENST00000614242 2813 ntBASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 HSPA7-201ENST00000445535 1927 ntBASIC12.75□□□□□ -0.37
CPEB3Q8NE35 Z93015.1-201ENST00000451718 390 ntBASIC12.75□□□□□ -0.37
CPEB3Q8NE35 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPEB3Q8NE35 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CPEB3Q8NE35 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms