Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AC015909.5-201ENST00000624336 2266 ntBASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AC104961.1-201ENST00000427605 771 ntBASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 RN7SL128P-201ENST00000467883 305 ntBASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 IFNWP2-201ENST00000431203 580 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 KRT18P15-201ENST00000458108 1291 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC145285.5-201ENST00000562217 361 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC142086.5-202ENST00000562500 217 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AL136982.5-201ENST00000605222 294 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 CDCA4P4-201ENST00000435216 680 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC027612.2-202ENST00000445955 1199 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 PRMT1P1-201ENST00000604252 1009 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 AC005274.1-201ENST00000623460 802 ntBASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP43Q8NDM7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AP000354.1-201ENST00000396982 456 ntBASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 PGAM1P11-201ENST00000416729 680 ntBASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AL080243.1-201ENST00000423293 1060 ntBASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP43Q8NDM7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms