Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 RNASEH2CP1-201ENST00000454281 502 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 KRT8P34-201ENST00000577607 1044 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC087072.1-201ENST00000603727 421 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 PAUPAR-201ENST00000630360 2965 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC084018.2-201ENST00000613093 2607 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 GALP-202ENST00000440823 889 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SEPHS2P1-201ENST00000511618 1162 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 BMF-206ENST00000558774 671 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC021321.1-201ENST00000607397 1113 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC015656.1-201ENST00000624209 3578 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 GGTLC4P-201ENST00000402176 664 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 IFNWP2-201ENST00000431203 580 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 EEF1GP8-201ENST00000506566 1154 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCDC168Q8NDH2 SSR4P1-203ENST00000599569 2260 ntBASIC12□□□□□ -0.49
CCDC168Q8NDH2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCDC168Q8NDH2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms