Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC006504.5-208ENST00000588784 2401 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 IMP3P2-201ENST00000489760 475 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC005740.2-201ENST00000511085 419 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 CHMP4BP1-201ENST00000556017 588 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 MIR3619-201ENST00000579667 83 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AC097724.1-201ENST00000609581 426 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AP001505.2-201ENST00000616815 443 ntBASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC33Q8N5R6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AL136309.1-201ENST00000403917 691 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AL133466.1-201ENST00000447582 150 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 RN7SL11P-201ENST00000471305 293 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 MESTP3-201ENST00000503460 968 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC245884.6-201ENST00000515672 1067 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC138696.2-201ENST00000607376 223 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC091544.8-201ENST00000619490 361 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CU633904.3-201ENST00000624042 1029 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC015967.2-201ENST00000624092 234 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AC006435.4-201ENST00000625037 234 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AL356737.1-201ENST00000634391 234 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 AL603764.1-201ENST00000636452 321 ntBASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC33Q8N5R6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC33Q8N5R6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms