Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.26■□□□□ 0.51
PROM2Q8N271 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PROM2Q8N271 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
PROM2Q8N271 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PROM2Q8N271 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PROM2Q8N271 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC023024.2-201ENST00000623561 1993 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PROM2Q8N271 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PROM2Q8N271 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC092573.1-201ENST00000433054 884 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC18.25■□□□□ 0.51
PROM2Q8N271 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC011431.1-201ENST00000512971 230 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 AC100858.1-201ENST00000514059 1228 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 RN7SKP155-201ENST00000516031 288 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC18.25■□□□□ 0.51
PROM2Q8N271 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC18.25■□□□□ 0.51
PROM2Q8N271 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 PRMT1P1-201ENST00000604252 1009 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC18.25■□□□□ 0.51
PROM2Q8N271 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC18.25■□□□□ 0.51
PROM2Q8N271 AC126755.5-201ENST00000622756 267 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 AC010531.8-201ENST00000623341 685 ntBASIC18.25■□□□□ 0.51
PROM2Q8N271 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.25■□□□□ 0.51
PROM2Q8N271 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PROM2Q8N271 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PROM2Q8N271 AC008033.3-201ENST00000612531 1407 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PROM2Q8N271 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 AC022080.1-201ENST00000366255 781 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 BX679664.3-201ENST00000414070 555 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.24■□□□□ 0.51
PROM2Q8N271 DEFT1P-201ENST00000453425 496 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 AC018635.1-201ENST00000468292 1030 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 AC113935.1-201ENST00000471722 555 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC18.24■□□□□ 0.51
PROM2Q8N271 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 AC126365.2-201ENST00000580630 379 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.24■□□□□ 0.51
PROM2Q8N271 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 AL512324.3-201ENST00000619383 882 ntBASIC18.24■□□□□ 0.51
PROM2Q8N271 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PROM2Q8N271 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.24■□□□□ 0.51
PROM2Q8N271 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PROM2Q8N271 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PROM2Q8N271 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PROM2Q8N271 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms