Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC140658.4-201ENST00000561990 352 ntBASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 AC007952.4-201ENST00000573866 637 ntBASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 MIR5196-201ENST00000578146 115 ntBASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS3Q8IXF0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 AC006372.4-201ENST00000624122 1543 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 AC099063.4-201ENST00000641099 1602 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 AC141586.1-203ENST00000567242 366 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 RN7SL665P-201ENST00000578793 300 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 RN7SL275P-201ENST00000582762 335 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 SIGLEC22P-201ENST00000599104 714 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 AC138466.5-201ENST00000624002 808 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 LINC00431-202ENST00000636375 159 ntBASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS3Q8IXF0 LINC00528-201ENST00000600723 2160 ntBASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.92□□□□□ -0.02
NPAS3Q8IXF0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms