Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 AC090505.1-201ENST00000430515 1834 ntBASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD3Q7Z3D4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 FAM58BP-201ENST00000439056 645 ntBASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AC012441.2-201ENST00000444843 739 ntBASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 RBM8B-201ENST00000555532 525 ntBASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AC009884.2-201ENST00000603110 324 ntBASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD3Q7Z3D4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 RN7SL371P-201ENST00000578099 267 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL118558.3-201ENST00000607414 1079 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 MIR6787-201ENST00000616675 61 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms